Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

 Score =  736 bits (1901), Expect = 0.0
 Identities = 376/740 (50%), Positives = 506/740 (68%), Gaps = 5/740 (0%)

Query: 1   MSSLRRKWISDPAFKMFKKVLPPLSQTEKEAMEAGSVWWDGELFSGKPDFTKLHHYPKPT 60
           + + R+  I+ P  K++K ++P +S TEKEA+EAG+ WW+ +LF+GKP++ KLH+YP   
Sbjct: 61  IGAFRKSVITRPLLKLYKGIMPEMSSTEKEAIEAGTTWWEADLFAGKPNWKKLHNYPVAR 120

Query: 61  LSAEEQSFIDNELETLLAMLDDYKIVKQDRDLPKEVWDYLRKERFFSLIISKEYGGREFS 120
           L+AEEQ+FI+  +E +  ML+ +++  Q  DLP+ +W YL+   FF++II K+YGG EFS
Sbjct: 121 LTAEEQAFIEGPVEEVCKMLNQHQVSHQLGDLPESIWQYLKDNGFFAMIIKKKYGGLEFS 180

Query: 121 ALANSTIVSRIATRSISTAVTVMVPNSLGPGELLSHYGTQEQKDYWLPRLADGTDIPCFA 180
           A A S ++ ++A  S   A TV VPNSLGPGELL HYGT  Q+D++LPRLA G ++PCFA
Sbjct: 181 AYAQSRVLQKLAGVSSELASTVGVPNSLGPGELLQHYGTPAQQDHYLPRLAKGLEVPCFA 240

Query: 181 LTGPEAGSDAGSIPDQGVVCYGKHEGKDVLGIRLSWNKRYITLAPVATVLGLAFKLSDPE 240
           LT PEAGSDAG+IPD G+VC G+ +G++VLG++L+WNKRYITLAPVATVLGLAFKL DP+
Sbjct: 241 LTSPEAGSDAGAIPDFGIVCKGQWQGEEVLGMKLTWNKRYITLAPVATVLGLAFKLQDPD 300

Query: 241 HLLGDKEEIGITCALIPASHEGVEIGERHDPLGLAFMNGPTRGQDVFIPMDWLIGGADYA 300
            LLGDKEE+GITCALIP    GVE G RH PL   F NGPTRG +VF+P+D++IGG + A
Sbjct: 301 KLLGDKEELGITCALIPTDVPGVETGRRHFPLNCMFQNGPTRGNEVFVPLDFIIGGPEMA 360

Query: 301 GKGWRMLVECLSAGRGISLPALGTAIGHLTARTTGAYGYVRKQFGMSIGKFEGVAEAMGR 360
           G+GWRMLVECLS GRGI+LP+         A  TGAY  +R+QF + IGK EG+ E M R
Sbjct: 361 GQGWRMLVECLSVGRGITLPSNSAGGIKTAAVATGAYARIRRQFKLPIGKLEGIEEPMAR 420

Query: 361 IGGLTYLLEATRTLTTTSLDLKEKPGIVTAIAKYHMTEIARTILNDAMDIHSGRAIQDGP 420
           IGG  YL++A  TLTTT +DL EKP +++AI KYH+T+  +  + DAMDIH G+ +  G 
Sbjct: 421 IGGNAYLMDAVTTLTTTGIDLGEKPSVISAIVKYHLTDRMQKCVIDAMDIHGGKGVCLGE 480

Query: 421 MNYLATHYLGVPVAITVEGANILTRNLMIFGQGATRCHPYVLKEMEAAANPDQQEGAKAF 480
            NYL   Y   P+AITVEGANILTR+++I+GQGA RCHPYVL EMEAA +PD  +    F
Sbjct: 481 NNYLGRGYQAAPIAITVEGANILTRSMIIYGQGAIRCHPYVLAEMEAAFDPDMHKSLNDF 540

Query: 481 DELLFKHIAHATKNSFGALFAALTGSRFIKANMSGPTQDYYKQMTRLSRALAVSADVAML 540
           D  LF HI   T N   + +  LT S F  +     T+ YY+ M R S  LA+ +D+AM 
Sbjct: 541 DSALFGHIGFTTSNLVRSFWLGLTSSYFSNSPYKDKTKRYYQHMNRFSANLALLSDLAMA 600

Query: 541 TLGGELKRKEMISARLGDALSYLYMGSAVLKKYEDEGRHQADLDYVHYAMQYCLHHAAKS 600
           TLGG LKRKE +SARLGD LS LY+ SA LK+Y+DEGR   DL  V +A++  L+    S
Sbjct: 601 TLGGGLKRKERVSARLGDLLSQLYLASATLKRYQDEGRQSEDLVLVQWAVEDALYKLQDS 660

Query: 601 LNQAYRNYPVTGVGAILKGLLFPLGNHFAPPSDELAVKLAESLMTPGAHRDRLTALCYIG 660
           L+    N+P+ G+G +L+ +LFP G     PSD L  K+A+ + TP A RDRL    +  
Sbjct: 661 LDDLLNNFPM-GLGRVLRVILFPFGRPLKRPSDVLDHKVAKIMQTPCASRDRLGKGQFWT 719

Query: 661 KGEDDSVGLMEKAFLAMYSVKGLERKLQQGVKEGKVARKGLLVDRL-AQAEQAGVLSADE 719
               ++VG+ E+ F  + + + L  K+ +    GK     + +D+L A+ +  G+LS +E
Sbjct: 720 PSPFNAVGIQEQTFKDILACEPLHDKICKAT--GK-RHPFMWLDKLAAEGKALGILSDEE 776

Query: 720 VASILAAEKLRSRAIQVDHF 739
           VA +  AE  R ++I VD F
Sbjct: 777 VALLERAEIGRMKSINVDDF 796