Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 758 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

 Score =  925 bits (2391), Expect = 0.0
 Identities = 453/739 (61%), Positives = 566/739 (76%)

Query: 1   MSSLRRKWISDPAFKMFKKVLPPLSQTEKEAMEAGSVWWDGELFSGKPDFTKLHHYPKPT 60
           + ++R + I+ P F  FKKVLPPLS TEKEAMEAG VWW+ ELF GKP++  LH Y +P 
Sbjct: 17  VKNIRMQCITRPVFAFFKKVLPPLSDTEKEAMEAGDVWWEAELFRGKPNWDTLHSYGRPR 76

Query: 61  LSAEEQSFIDNELETLLAMLDDYKIVKQDRDLPKEVWDYLRKERFFSLIISKEYGGREFS 120
           L+ EE++FID ++ T L M+DD+ IV++ +DLP E+WDY +KE FF+LII KEYGG+ FS
Sbjct: 77  LTEEEKAFIDEQVMTALTMIDDFNIVQERKDLPPELWDYFKKEGFFALIIPKEYGGKAFS 136

Query: 121 ALANSTIVSRIATRSISTAVTVMVPNSLGPGELLSHYGTQEQKDYWLPRLADGTDIPCFA 180
           A ANSTIVS++A+RS+S AV+VMVPNSLGPGELL+HYGT+EQ+D+WLP+LA G  +PCFA
Sbjct: 137 AYANSTIVSKLASRSVSAAVSVMVPNSLGPGELLTHYGTKEQRDHWLPKLASGEAVPCFA 196

Query: 181 LTGPEAGSDAGSIPDQGVVCYGKHEGKDVLGIRLSWNKRYITLAPVATVLGLAFKLSDPE 240
           LTGPEAGSDAG+IPD G+VC G+ +G++VLG++L+W+KRYITLAPV+TVLGLAF++ DPE
Sbjct: 197 LTGPEAGSDAGAIPDTGIVCRGEFQGEEVLGLKLNWDKRYITLAPVSTVLGLAFQMRDPE 256

Query: 241 HLLGDKEEIGITCALIPASHEGVEIGERHDPLGLAFMNGPTRGQDVFIPMDWLIGGADYA 300
            LLGDKEEIGITCALIP  H GVEIG RH+PL + FMNG TRG+DVFIP+DW+IGG  YA
Sbjct: 257 GLLGDKEEIGITCALIPTDHPGVEIGNRHNPLNMGFMNGTTRGEDVFIPLDWIIGGPQYA 316

Query: 301 GKGWRMLVECLSAGRGISLPALGTAIGHLTARTTGAYGYVRKQFGMSIGKFEGVAEAMGR 360
           G+GWRMLVECLSAGRGISLPAL TA GH+T +TT AY YVR QFG+S+G+FEGV EA+ R
Sbjct: 317 GRGWRMLVECLSAGRGISLPALATASGHVTTKTTTAYSYVRHQFGLSLGQFEGVQEALAR 376

Query: 361 IGGLTYLLEATRTLTTTSLDLKEKPGIVTAIAKYHMTEIARTILNDAMDIHSGRAIQDGP 420
           I   TY LEA R LTTT +DLK KP +VTAIAKYHMTE+ R +LNDAMDI SG+ IQ GP
Sbjct: 377 IIANTYQLEAARRLTTTGIDLKVKPSVVTAIAKYHMTEMGRDVLNDAMDIQSGKGIQLGP 436

Query: 421 MNYLATHYLGVPVAITVEGANILTRNLMIFGQGATRCHPYVLKEMEAAANPDQQEGAKAF 480
            NYL   Y+  P++ITVEGANILTR+LMIFGQGATRCHPYVL EMEAAA  D  E  + F
Sbjct: 437 KNYLGHGYMATPISITVEGANILTRSLMIFGQGATRCHPYVLAEMEAAAMEDTGEALERF 496

Query: 481 DELLFKHIAHATKNSFGALFAALTGSRFIKANMSGPTQDYYKQMTRLSRALAVSADVAML 540
           D LL  H+ +A +N+  +L+ ALTGSRF  A +SG T+ YYK MTRLS ALA   D++ML
Sbjct: 497 DNLLLGHMGYAARNALSSLWGALTGSRFNSAPVSGETKQYYKDMTRLSAALAFVTDLSML 556

Query: 541 TLGGELKRKEMISARLGDALSYLYMGSAVLKKYEDEGRHQADLDYVHYAMQYCLHHAAKS 600
            +GG+LKRKEM+SARLGD LS LY+GSA LK +ED GR Q DL  VHY MQ  L  AAK+
Sbjct: 557 VMGGDLKRKEMLSARLGDVLSELYLGSATLKLFEDNGRQQDDLPTVHYVMQLRLQRAAKA 616

Query: 601 LNQAYRNYPVTGVGAILKGLLFPLGNHFAPPSDELAVKLAESLMTPGAHRDRLTALCYIG 660
           L  A RN+P   +   ++ L+FPLGNHF  P D+L + + +S++ PG  RDRLT LC   
Sbjct: 617 LYGALRNFPNRPLAYAMRALVFPLGNHFNGPDDKLTIAVCQSMLRPGPARDRLTHLCPDF 676

Query: 661 KGEDDSVGLMEKAFLAMYSVKGLERKLQQGVKEGKVARKGLLVDRLAQAEQAGVLSADEV 720
           +G++  +  +E AF+A Y  K L + L+   KEGK+ RK       AQA +  +++  E 
Sbjct: 677 EGDNGGIAEVEDAFIAQYKAKHLFKTLRNAQKEGKLERKQANDALYAQAYELKIITEAEH 736

Query: 721 ASILAAEKLRSRAIQVDHF 739
            ++L A++LR  AI VD F
Sbjct: 737 DTLLEADRLRKIAIAVDEF 755