Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 815 a.a., oxidoreductase, acyl-CoA dehydrogenase family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  743 bits (1918), Expect = 0.0
 Identities = 380/739 (51%), Positives = 504/739 (68%), Gaps = 3/739 (0%)

Query: 1   MSSLRRKWISDPAFKMFKKVLPPLSQTEKEAMEAGSVWWDGELFSGKPDFTKLHHYPKPT 60
           +S+ R+  IS P  K+++ ++P +S TEKEA+EAG+ WW+ +LF+G P++ KLH+YP   
Sbjct: 61  ISAFRQNVISRPLMKVYRGIMPEMSSTEKEAIEAGTTWWEADLFAGNPNWKKLHNYPVAR 120

Query: 61  LSAEEQSFIDNELETLLAMLDDYKIVKQDRDLPKEVWDYLRKERFFSLIISKEYGGREFS 120
           LSA+EQ+F+D  +E +  M++ +++  Q  DLP EVW YL+   FF++II K+YGG E+S
Sbjct: 121 LSADEQAFLDGPVEEVCRMVNQHQVSHQLADLPAEVWQYLKDHGFFAMIIKKKYGGLEYS 180

Query: 121 ALANSTIVSRIATRSISTAVTVMVPNSLGPGELLSHYGTQEQKDYWLPRLADGTDIPCFA 180
           A A S ++ ++A  S   A TV VPNSLGPGELL HYGT EQ++Y+LPRLA G ++PCFA
Sbjct: 181 AYAQSRVLQKLAGLSSELASTVGVPNSLGPGELLQHYGTPEQQNYYLPRLAKGLEVPCFA 240

Query: 181 LTGPEAGSDAGSIPDQGVVCYGKHEGKDVLGIRLSWNKRYITLAPVATVLGLAFKLSDPE 240
           LT PEAGSDAGSIPD G+VC G+ EG++VLG++L+WNKRYITLAPVATVLGLAFKL DP+
Sbjct: 241 LTSPEAGSDAGSIPDFGIVCKGQWEGEEVLGMKLTWNKRYITLAPVATVLGLAFKLRDPD 300

Query: 241 HLLGDKEEIGITCALIPASHEGVEIGERHDPLGLAFMNGPTRGQDVFIPMDWLIGGADYA 300
           HLLGDKEE+GITCALIP   EGVE G RH PL   F NGPTRG+DVF+P+ ++IGG   A
Sbjct: 301 HLLGDKEELGITCALIPTDVEGVETGRRHFPLNCMFQNGPTRGKDVFVPLSFIIGGPKMA 360

Query: 301 GKGWRMLVECLSAGRGISLPALGTAIGHLTARTTGAYGYVRKQFGMSIGKFEGVAEAMGR 360
           G+GWRMLVECLS GRGI+LP+         A  TGAY  +R+QF + IGK EG+ E M R
Sbjct: 361 GQGWRMLVECLSVGRGITLPSNSAGGVKTAALATGAYARIRRQFKLPIGKLEGIEEPMAR 420

Query: 361 IGGLTYLLEATRTLTTTSLDLKEKPGIVTAIAKYHMTEIARTILNDAMDIHSGRAIQDGP 420
           IGG  YL++A  +LTTT +DL EKP +++AI KYH+T+  +  + DAMDIH G+ +  GP
Sbjct: 421 IGGNAYLMDAVTSLTTTGIDLGEKPSVISAIVKYHLTDRMQKCVIDAMDIHGGKGVCLGP 480

Query: 421 MNYLATHYLGVPVAITVEGANILTRNLMIFGQGATRCHPYVLKEMEAAANPDQQEGAKAF 480
            NYL   Y   P+AITVEGANILTR+++I+GQGA RCHPYVL EME+A +    +G   F
Sbjct: 481 NNYLGRGYQAAPIAITVEGANILTRSMIIYGQGAIRCHPYVLPEMESAFDTQSGQGLANF 540

Query: 481 DELLFKHIAHATKNSFGALFAALTGSRFIKANMSGPTQDYYKQMTRLSRALAVSADVAML 540
           D  +F HI  AT N   + +  LT SRF  A  S  T+ YY+ M R S  LA+ +D+AM 
Sbjct: 541 DAAIFGHIGFATSNFVRSFWLGLTSSRFSNAPYSDKTKRYYQHMNRFSANLALLSDLAMA 600

Query: 541 TLGGELKRKEMISARLGDALSYLYMGSAVLKKYEDEGRHQADLDYVHYAMQYCLHHAAKS 600
           TLGG LKRKE ISARLGD LS LY+ SA LK+Y+DEGR   DL  V +A++  L+    S
Sbjct: 601 TLGGNLKRKERISARLGDLLSQLYLASATLKRYQDEGRQTDDLPLVQWAVEDALYKLQAS 660

Query: 601 LNQAYRNYPVTGVGAILKGLLFPLGNHFAPPSDELAVKLAESLMTPGAHRDRLTALCYIG 660
           L+    N+P+ G+G +L+ ++FP G     PSD L  K+A+ + TP   RDRL    +  
Sbjct: 661 LDDLLDNFPM-GLGGVLRTIMFPFGRPLKRPSDVLDHKVAKIMQTPCESRDRLGKGQFWT 719

Query: 661 KGEDDSVGLMEKAFLAMYSVKGLERKLQQGVKEGKVARKGLLVDRLAQAEQAGVLSADEV 720
             E ++VG+ E+    + + + L  K+ +    GK      L    A+ +  GVLS  EV
Sbjct: 720 NSEHNAVGIQEQTLKDILAAEPLFDKVCKA--SGKRLPFMWLDKVAAEGKALGVLSDSEV 777

Query: 721 ASILAAEKLRSRAIQVDHF 739
             +  AE  R ++I VD F
Sbjct: 778 QLLERAEIGRMKSINVDDF 796