Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) from Shewanella sp. ANA-3

 Score = 77.8 bits (190), Expect = 1e-18
 Identities = 99/388 (25%), Positives = 166/388 (42%), Gaps = 43/388 (11%)

Query: 66  QSFIDNELETLLAMLDDYKIVKQDRDLPKEVWDYLRKERFFSLIISKEYGGREFSALANS 125
           + F  +EL    A  D+      +   PK+V     +  F SL   +  GG   S L  S
Sbjct: 17  RQFAADELAPFAAKWDE------EHHFPKDVIQKAGELGFCSLYSPESEGGMGLSRLDAS 70

Query: 126 TIVSRIATRSISTAVTVMVPNSLGPGELLSHYGTQEQKDYWLPRLADGTDIPCFALTGPE 185
            I   ++    +T   + + N      +++ +GT   +  W   L  G  +  + LT P 
Sbjct: 71  IIFEELSKGCTATTAMLTIHNMAT--WMVTTWGTDTLRQAWSEPLTTGQMLASYCLTEPG 128

Query: 186 AGSDAGSIPDQGVVCYGKHEGKDVLGIRLSWNKRYITLAPVATVLGLAFKLSDPEHLLGD 245
           AGSDA S+  + V      EG + +   +S +K +I+ A    +L +  +        G 
Sbjct: 129 AGSDAASLQTKAV-----REGDEYV---VSGSKMFISGAGSTELLVVMCR-------TGQ 173

Query: 246 KEEIGITCALIPASHEGVEIGERHDPLGLAFMNGPTR---GQDVFIPMDWLIGGADYAGK 302
               GI+   IPA  EG+  G+  D +G  +   PTR     +V +P+  L+G     G+
Sbjct: 174 AGPKGISAIAIPADSEGIIYGKAEDKMG--WNAQPTRLVTFDNVRVPVANLLG---EEGQ 228

Query: 303 GWRMLVECLSAGR-GISLPALGTAIGHLTARTTGAYGYVRKQFGMSIGKFEGVAEAMGRI 361
           G+   ++ L  GR  I+  ++GTA   L   T   Y   R+QFG  +  F+ +   +  +
Sbjct: 229 GFTFAMKGLDGGRINIATCSVGTAQAALERAT--QYMNERQQFGKPLAAFQALQFKLADM 286

Query: 362 GGLTYLLEATRTLTTTSLDLKEKPGIVT---AIAKYHMTEIARTILNDAMDIHSGRA-IQ 417
              T L+ A + +   +  L       T   A+AK   T++   + + A+ IH G   I+
Sbjct: 287 A--TELVAARQMVRLAAFKLDSGDPEATAYCAMAKRFATDVGFQVCDAALQIHGGYGYIR 344

Query: 418 DGPMNYLATHYLGVPVAITVEGANILTR 445
           + P   L  H+  V V   +EG N + R
Sbjct: 345 EYP---LERHFRDVRVHQILEGTNEIMR 369