Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) from Shewanella sp. ANA-3

 Score = 81.6 bits (200), Expect = 7e-20
 Identities = 100/395 (25%), Positives = 164/395 (41%), Gaps = 44/395 (11%)

Query: 66  QSFIDNELETLLAMLDDYKIVKQDRDLPKEVWDYLRKERFFSLIISKEYGGREFSALANS 125
           Q F  +E+  + A +D       D   P E+W  L       + + +EYGG     LA+ 
Sbjct: 24  QDFAKHEIAPIAAKVD------HDNAFPNEIWPVLGGMGLLGVTVPEEYGGANMGYLAHV 77

Query: 126 TIVSRIATRSISTAVTVMVPNSLGPGELLSHYGTQEQKDYWLPRLADGTDIPCFALTGPE 185
             +  I+  S S  ++    ++L   ++ +  G  EQK  +LP+L  G  I   A++ P 
Sbjct: 78  VAMEEISRASASIGLSYGAHSNLCVNQI-NRNGNAEQKAKYLPKLVSGEHIGALAMSEPN 136

Query: 186 AGSDAGSIPDQGVVCYGKHEGKDVLGIRLSWNKRYITLAPVATVLGLAFK--LSDPEHLL 243
           AGSD        VV    H  K+     L+ NK +IT  P A    +  K  L+   H  
Sbjct: 137 AGSD--------VVSMKLHARKEGDRYILNGNKMWITNGPDANTYVIYAKTDLTKGAH-- 186

Query: 244 GDKEEIGITCALIPASHEGVEIGERHDPLGLAFMNG-PTRGQDVFIPMDWLIGGADYAGK 302
                 GIT  ++    +G    ++ D LG+   N      +DV +P + ++GG +    
Sbjct: 187 ------GITAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDVEVPEENILGGLN---N 237

Query: 303 GWRMLVECLSAGRGISLPALGTAIGHLTARTTGAYGYV--RKQFGMSIGKFEGVAEAMGR 360
           G ++L+  L   R +     G  +G + A       Y+  R+QFG SIG+F+ V    G+
Sbjct: 238 GVKVLMSGLDYERVV---LSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLV---QGK 291

Query: 361 IGGLTYLLEATRTL---TTTSLDLKEKPGIVTAIAKYHMTEIARTILNDAMDIHSGRAIQ 417
           +  +   + A +        S D  E      A A  +  E+A  +  DA+ +  G    
Sbjct: 292 LADMYTGMNAAKAYVYSVAKSCDRGETTRKDAAGAILYSAELATKMALDAIQLLGG---- 347

Query: 418 DGPMNYLATHYLGVPVAITVEGANILTRNLMIFGQ 452
           +G +N  AT  L     +   GA       M+ G+
Sbjct: 348 NGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGR 382