Pairwise Alignments

Query, 484 a.a., glycogen synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., starch synthase (RefSeq) from Shewanella loihica PV-4

 Score =  137 bits (344), Expect = 1e-36
 Identities = 150/533 (28%), Positives = 231/533 (43%), Gaps = 93/533 (17%)

Query: 18  KSGGLADVAKALPQALKALHQQVAIALPAYRSVPGKEDAELVLETELTHW--PH--TQYR 73
           K GG+ADV + LP AL  L     + +P+Y  +  ++ AE + E  +  +  PH  T YR
Sbjct: 27  KVGGMADVIRDLPGALYPLGVCSDVIMPSYGFLHRQQGAEPLGELVVDFYGQPHWLTLYR 86

Query: 74  VLKRDLDGVPIYLIDCPAYFDRPALYAE--NNQAYADNGERFGFFSAACLD-VLPKLGIQ 130
                L  V ++L+D P +     +Y    +++ +A++  +F  F       VL  L  +
Sbjct: 87  ASHPSLPEVNLFLLDHPLFDQGGKIYTPGASDRPFAEDANKFALFCLGVAKAVLSGLMSR 146

Query: 131 PDIIHANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHNAIFKGIFSYHQLEVIPELNLS 190
           PD +H +DWH G++  L      Y +  + +  VL++HN   +G     Q     +  L 
Sbjct: 147 PDHLHLHDWHCGVLALLRAFAPEYAAL-QAIPCVLSIHNLAIQGARPLTQEHSSLQAWLP 205

Query: 191 GMEFLQYGHDHVSM------------LRAGIAFADKVNAVSPNYAAELLTP-------LG 231
            + F     D ++             LRA I  +D+V+ VSP+YA E+L P       +G
Sbjct: 206 SL-FASLERDALNQVIDPRYPQCFNPLRAAIVLSDRVHLVSPSYAQEVLRPSSPDKGFIG 264

Query: 232 AHGLVDDFVRR--ARDLHGIVNGCDYSEWNPR--------------TDHYLPATYSDEPE 275
             GL  D  ++  A  LHGI+NGC+Y     R              TD  LP    D  E
Sbjct: 265 GEGLEADLQQKQQAGALHGILNGCEYPSKLKRSGQLSKRQALLRGNTDKLLPLI--DSAE 322

Query: 276 SMRKGKALCKT---------ALQEELHL----PVTDVP--LFGMVCRLTHQK-------- 312
              +G  LC+T         AL     L       D P  L   V RLT QK        
Sbjct: 323 QAIQGW-LCQTPWVRSVDQLALMSLARLRRQSEFQDAPRLLLTSVGRLTDQKMAILCYRD 381

Query: 313 -----GFHYLLPILEQFLRNNVQVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLA 367
                   YLL +L +   N + + I+G+G+  + A+L ++A  ++    F+  +   L+
Sbjct: 382 QQGISTLEYLLKLLAEHAPNGL-MAILGSGDQAIEAQLAQLAGRYQ-NLLFINGFDLPLS 439

Query: 368 HWVEAGSDFFLMPSEFEACGLNQIYSMAYGTLPIVREVGGLKDTVNDYDKFPERATGFGY 427
             +    + F+MPS FE CG++Q+ +M      +V  VGGLKDTV+  +       GF +
Sbjct: 440 DTLYECGNLFIMPSSFEPCGISQMLAMRAAQPCLVHGVGGLKDTVSHGE------DGFVF 493

Query: 428 QEPTPEALLITMQRALLFYLQQ------PEEMLKVQQRAMQQNFSWEESAQEY 474
              +    L     ALL  L Q       E    +   A Q+ FSW  SA+ Y
Sbjct: 494 YGDS----LAEQSSALLEILAQTLPLIGKEAWHVICDNASQKRFSWGASAKRY 542