Pairwise Alignments

Query, 336 a.a., PurR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., Ribose operon repressor from Pseudomonas fluorescens FW300-N2E2

 Score =  246 bits (627), Expect = 8e-70
 Identities = 140/336 (41%), Positives = 214/336 (63%), Gaps = 6/336 (1%)

Query: 1   MATIKDVARLAGVSTTTVSHVINKTRFVAETTQEKVMEAVKQLNYAPSAVARSLKCNTTR 60
           MATIKDVA LAG+S TTVSHV+NKTR V+E  + KV  A+++L+Y PSAVARSLK  TT 
Sbjct: 1   MATIKDVAALAGISYTTVSHVVNKTRPVSEEVRLKVEAAIERLDYVPSAVARSLKAKTTA 60

Query: 61  TIGMLVTQSTNLFFSEVIDGVESYCYRQGYTLILCNTGGIYEKQRDYIRMLAEKRVDGIL 120
           TIG+LV  S N +F+E+  G+E YC R GY +ILCN+    +KQR Y+R+L EKR+DG++
Sbjct: 61  TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNPDKQRSYLRVLLEKRIDGLI 120

Query: 121 VMCSDLTQELQDMLDAHKDIPKVVMDWGPETSHADKIIDNSEEGGYLATKYLTDRGHTEI 180
              +     L + L ++   P V++D G E   AD +  + E G YLAT++L + GH +I
Sbjct: 121 FASAGGDVGLAEGL-SNVRTPMVIVDRGLEGVDADLVRIDHEYGAYLATRHLLELGHRDI 179

Query: 181 ACLSGHFVKAACQERIQGFRRAMAEAKLTVNEDWILEGNFECDTAVLAADKIIAMDKRPT 240
           A + G    +  Q R+ G+ RA+ EA + +  + +LE +F       AA +++ + + P+
Sbjct: 180 AFIGGPANTSVAQMRLAGYCRALKEAGIELPVERMLESDFTSTGGYRAAAQLL-VQQPPS 238

Query: 241 AVFCFNDTMALGLMSRLQQKGIRIPEDMSVIGYDNIELAEYFSPPLTTVHQPKRRVGKNA 300
           A+F  ND + +G++    ++ +R+P ++SVIG+D+I+++ Y  P LTTV Q   ++G+ A
Sbjct: 239 AIFAANDMIGIGVLRAAAERNVRVPSELSVIGFDDIQMSRYVYPALTTVGQSILQLGEMA 298

Query: 301 FEILLERIKDK--EHERRIFEMHPEIVERDTVKDLT 334
            E+LL RI       E+RI  + P IV R++   L+
Sbjct: 299 AEVLLRRIATPGLATEQRI--VTPSIVLRESTAPLS 332