Pairwise Alignments

Query, 234 a.a., two-component system response regulator TorR from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  153 bits (387), Expect = 3e-42
 Identities = 88/233 (37%), Positives = 130/233 (55%), Gaps = 10/233 (4%)

Query: 4   HVLVVEDDLVTRSKLSGYFQNEGYQVTEAESGAQMREALELNDIDLVLLDINLPGEDGLL 63
           ++L+V+DD   R  L  Y    G+QV     G + R AL     DLV+LD+ LP EDG  
Sbjct: 7   NILLVDDDQEIRELLQTYLSRSGFQVRGVPDGGEFRAALCAEPADLVILDVMLPDEDGFS 66

Query: 64  LTRELRSQSEIG---IILVTGRTDSIDKIVGLEMGADDYVTKPVDLRELQVRVKNLLWRI 120
           L R +R    +    II++T  +D  D+++GLE+GADDY+ KP   REL  R+K LL R+
Sbjct: 67  LCRWIRQHERLASMPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELLARIKALLRRV 126

Query: 121 SLAQRERITDKHDDKLVHFGEWTFD-VQRRALSRNGEPVKLTKAEYELLVALSSYPNQVL 179
           S AQ ER +D     ++ F EW  D +  R    +GE V L+ A++ LL     +P Q+L
Sbjct: 127 SFAQ-ERGSD-----VLAFDEWRLDMISHRLFHADGEEVFLSGADFALLKLFLDHPQQIL 180

Query: 180 SRERILNMISHRVDAPNDRTIDVLIRRMRAKMEMDPKNPQIFVTVHGEGYMFA 232
            R+ I N    R   P +R +D+ + R+R ++    K+P++  TV G GY+ A
Sbjct: 181 DRDTIANATRGREVMPLERIVDMAVSRLRQRLRDTGKSPRLIRTVRGSGYLLA 233