Pairwise Alignments

Query, 234 a.a., two-component system response regulator TorR from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., DNA-binding transcriptional regulator TorR (RefSeq) from Shewanella amazonensis SB2B

 Score =  269 bits (687), Expect = 4e-77
 Identities = 137/237 (57%), Positives = 181/237 (76%), Gaps = 11/237 (4%)

Query: 1   MSYHVLVVEDDLVTRSKLSGYFQNEGYQVTEAESGAQMREALELNDIDLVLLDINLPGED 60
           M+Y VLVV+D+ V R++L GYF  EGY+V EA +G +M + L L  +DL++LDINLPG D
Sbjct: 1   MAYTVLVVDDEAVIRTRLKGYFSKEGYRVLEAANGEEMWQQLALAHVDLIMLDINLPGTD 60

Query: 61  GLLLTRELRSQSEIGIILVTGRTDSIDKIVGLEMGADDYVTKPVDLRELQVRVKNLLWRI 120
           GL LTRELRS+S++GIILV+GR +++D+IVGLEMGADDYVTKP +LREL VRVKNLLWRI
Sbjct: 61  GLSLTRELRSRSDVGIILVSGRDETVDRIVGLEMGADDYVTKPFELRELLVRVKNLLWRI 120

Query: 121 SLAQRER-----ITDKHDDKLVHFGEWTFDVQRRALSRNGEPVKLTKAEYELLVALSSYP 175
           SL ++ +       D+ DD+ + F ++  ++  R LSR    +KLTKAE+ELLVA + +P
Sbjct: 121 SLVEKAKQQAVAAMDEGDDR-IEFDDYVLELGSRKLSRGEAVIKLTKAEFELLVAFALHP 179

Query: 176 NQVLSRERILNMISHRVDAPNDRTIDVLIRRMRAKMEMDPKNPQIFVTVHGEGYMFA 232
            QVLSRER++   SHR +  NDRTIDV+IRR+R K+     NP++FVTVHGEGY+FA
Sbjct: 180 RQVLSRERLMQQTSHRSEDANDRTIDVIIRRLRGKL-----NPELFVTVHGEGYLFA 231