Pairwise Alignments

Query, 234 a.a., two-component system response regulator TorR from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., transcriptional regulatory protein OmpR (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  168 bits (425), Expect = 1e-46
 Identities = 90/231 (38%), Positives = 140/231 (60%), Gaps = 3/231 (1%)

Query: 5   VLVVEDDLVTRSKLSGYFQNEGYQVTEAESGAQMREALELNDIDLVLLDINLPGEDGLLL 64
           +LVV+DD+  R+ L  Y   +GYQV  A +  QM   LE  +  L++LD+ LPGEDGL +
Sbjct: 8   ILVVDDDMRLRALLERYLMEQGYQVRSAANAEQMDRLLERENFHLIVLDLMLPGEDGLSI 67

Query: 65  TRELRSQ-SEIGIILVTGRTDSIDKIVGLEMGADDYVTKPVDLRELQVRVKNLLWRISLA 123
            R LR Q S I I+++T + D +D+I+GLE+GADDY+ KP + REL  R+K ++ R +  
Sbjct: 68  CRRLRQQGSTIPIVMLTAKGDEVDRIIGLELGADDYLPKPFNPRELLARIKAVMRRQT-- 125

Query: 124 QRERITDKHDDKLVHFGEWTFDVQRRALSRNGEPVKLTKAEYELLVALSSYPNQVLSRER 183
           Q         +  + FGE++ D+  R +    E + LT  E+ +L  L ++P + LSR++
Sbjct: 126 QDVPGAPAQQEAEIRFGEFSLDLATREMYHGDEAIVLTSGEFAVLKVLVTHPREPLSRDK 185

Query: 184 ILNMISHRVDAPNDRTIDVLIRRMRAKMEMDPKNPQIFVTVHGEGYMFAGD 234
           ++N+   R  +  +R+IDV + R+R  +E DP NP+   TV G GY+F  D
Sbjct: 186 LMNLARGRDYSALERSIDVQVSRLRRLIEKDPANPRYIQTVWGLGYVFVPD 236