Pairwise Alignments

Query, 234 a.a., two-component system response regulator TorR from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., torcad operon transcriptional regulatory protein TorR (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  253 bits (646), Expect = 2e-72
 Identities = 135/236 (57%), Positives = 171/236 (72%), Gaps = 9/236 (3%)

Query: 1   MSYHVLVVEDDLVTRSKLSGYFQNEGYQVTEAESGAQMREALELNDIDLVLLDINLPGED 60
           M+Y VLVV+D++V R++L GYF+ EGY+V EA  G QM        IDL++LDINLPG D
Sbjct: 1   MAYSVLVVDDEVVIRARLKGYFEKEGYRVVEAADGEQMWYEFNRQHIDLIMLDINLPGVD 60

Query: 61  GLLLTRELRSQSEIGIILVTGRTDSIDKIVGLEMGADDYVTKPVDLRELQVRVKNLLWRI 120
           GL LTRELRS+S +GIILV+GR +SIDKIVGLEMGADDYVTKP +LREL VRVKNLLWRI
Sbjct: 61  GLSLTRELRSRSHVGIILVSGRDESIDKIVGLEMGADDYVTKPFELRELLVRVKNLLWRI 120

Query: 121 SL---AQRERITD-KHDDKLVHFGEWTFDVQRRALSRNGEPVKLTKAEYELLVALSSYPN 176
           SL   A++  + +    D L+ F  +  ++  R L +  E +KLTKAE+ELL     +P 
Sbjct: 121 SLVKQAEQALVQELSQPDDLISFEGYQLELNSRKLRQGEELIKLTKAEFELLTVFVLHPQ 180

Query: 177 QVLSRERILNMISHRVDAPNDRTIDVLIRRMRAKMEMDPKNPQIFVTVHGEGYMFA 232
           QVLSRER++   SHR    NDRTIDV+IRR+R K+     + ++FVTVHGEGY+FA
Sbjct: 181 QVLSRERLMQQTSHRNQDVNDRTIDVIIRRLRNKL-----HAELFVTVHGEGYLFA 231