Pairwise Alignments

Query, 260 a.a., tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) from Pseudomonas fluorescens FW300-N2E2

 Score =  150 bits (379), Expect = 2e-41
 Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 9/250 (3%)

Query: 4   DRNFDDIAHKFAKNIYGSDKGEIRQVIVWEDLEQLLSQLDTQKVPLHVLDAGGGLAQVSQ 63
           DR+FD +A +FA+ IYG  KG IR  ++  DL + L Q      PL VLD G GL  +S 
Sbjct: 3   DRHFDQLATRFAEKIYGGAKGAIRLAVLQADLLEALPQR-----PLRVLDIGAGLGHMSL 57

Query: 64  KIARLGHRVTLCDLSSEMLQLAEQDIANNGLLEQYRFVHSPVQTIQAHLDAPVDLVLFHA 123
            +A  GH+VTL + +  ML+ A Q  A  G  +   F+ +P Q +   L  P DLVL HA
Sbjct: 58  WLAERGHQVTLAEPAEPMLEGARQRFAEAG--QSATFIQAPWQDLLGQLTEPYDLVLCHA 115

Query: 124 VMEWLAEPKPALQNLLAQVRPGGMVSVMFYNYHGLVYKNAVCGNIPHVLEDMPHRKRFKL 183
           V+EWLAEP   L  L     PGG +S+ FYN   LVY+N + G+   + ++    ++  L
Sbjct: 116 VLEWLAEPHAILPVLHQLTVPGGWLSLAFYNRDALVYRNLLKGHFRKLRKNDMAGEKQSL 175

Query: 184 QPQKGLLPEEVYQWIEESSFEICGKSGIRCFSDYIGNMKNMGEYQYEDLVALERKFCRQE 243
            PQ+ L P E+   + E  +++  +SG+R F DY+  ++  G  +   L+ +E    R  
Sbjct: 176 TPQQPLDPRELAAQL-EGLWQVENQSGVRVFHDYM-PVEFQGRVELAQLLEMELAHRRHP 233

Query: 244 PYLSLGRYIH 253
            +  LGRY+H
Sbjct: 234 AFAGLGRYLH 243