Pairwise Alignments

Query, 260 a.a., tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 49.3 bits (116), Expect = 7e-11
 Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 14/165 (8%)

Query: 51  VLDAGGGLAQVSQKIARLGHRVTLCDLSSEMLQLAEQDIANNGLLEQYRFVHSPVQTIQA 110
           VLD G G   +S+ +ARLG +VT  DL+ E++++A      + +   YR     V+ + A
Sbjct: 59  VLDVGCGGGLLSEAMARLGAQVTAIDLAPELVKVARLHSLESSVQVDYRV--QSVEDLAA 116

Query: 111 HLDAPVDLVLFHAVMEWLAEPKPALQNLLAQVRPGGMVSVMFYNYHGLVYKNAVCGNIPH 170
                 D V    ++E + +P   ++   + ++PGG + +   N     +  AV G   +
Sbjct: 117 EQPGSFDAVTCMEMLEHVPDPLAIIRACASLLKPGGTLFLSTLNRTPAAFALAVVG-AEY 175

Query: 171 VLEDMP----HRKRFKLQPQKGLLPEEVYQWIEESSFEICGKSGI 211
           +   +P    H K F       + P E+  W+  +  ++   SG+
Sbjct: 176 IARLLPKGTHHYKDF-------IKPSELAAWLRTAELQLQDVSGM 213