Pairwise Alignments

Query, 260 a.a., tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., smtA protein from Pseudomonas syringae pv. syringae B728a

 Score =  140 bits (352), Expect = 3e-38
 Identities = 89/250 (35%), Positives = 135/250 (54%), Gaps = 9/250 (3%)

Query: 4   DRNFDDIAHKFAKNIYGSDKGEIRQVIVWEDLEQLLSQLDTQKVPLHVLDAGGGLAQVSQ 63
           DR+FD +A +FA+ IYG  KG IR  ++  DL + L        PL VLD G GL  +S 
Sbjct: 3   DRHFDQLATRFAEKIYGGAKGAIRLAVLQADLTENLPAR-----PLRVLDIGAGLGHMSL 57

Query: 64  KIARLGHRVTLCDLSSEMLQLAEQDIANNGLLEQYRFVHSPVQTIQAHLDAPVDLVLFHA 123
            +A  GH+VTL + +  ML+ A Q  A+ G  +   F+ +P Q +   L    DLVL HA
Sbjct: 58  WLAEQGHQVTLAEPAEPMLEGARQRFADAG--QTATFIQAPWQALPELLSDTYDLVLCHA 115

Query: 124 VMEWLAEPKPALQNLLAQVRPGGMVSVMFYNYHGLVYKNAVCGNIPHVLEDMPHRKRFKL 183
           V+EWLAEP   L  L    +  G +S+ FYN   LVY+N + G+   + ++    ++  L
Sbjct: 116 VLEWLAEPHSILPVLRRLTKDDGWLSLAFYNRDALVYRNLLKGHFRKMRKNDMAGEKQSL 175

Query: 184 QPQKGLLPEEVYQWIEESSFEICGKSGIRCFSDYIGNMKNMGEYQYEDLVALERKFCRQE 243
            PQ+ L P E+   + E  +++  +SG+R F DY+  ++     +  DL+ +E    R  
Sbjct: 176 TPQQPLDPRELAAQL-EGLWQVETRSGVRVFHDYM-PVEFQARAELTDLLEMELAHRRHP 233

Query: 244 PYLSLGRYIH 253
            +  LGRY+H
Sbjct: 234 AFAGLGRYLH 243