Pairwise Alignments

Query, 260 a.a., tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., methyltransferase type 12 (RefSeq) from Shewanella loihica PV-4

 Score =  191 bits (484), Expect = 2e-53
 Identities = 97/255 (38%), Positives = 148/255 (58%), Gaps = 7/255 (2%)

Query: 3   EDRNFDDIAHKFAKNIYGSDKGEIRQVIVWEDLEQLLSQLDTQKVPLHVLDAGGGLAQVS 62
           +D+NFD +A KFAKNIYG+ KGE+R  ++W D+ Q ++QL   + PL +LDAGGG    S
Sbjct: 26  QDKNFDALAGKFAKNIYGTPKGEVRAAVLWRDISQAMTQLP--EGPLRILDAGGGFGFFS 83

Query: 63  QKIARLGHRVTLCDLSSEMLQLAEQDIA----NNGLLEQYRFVHSPVQTIQAHLDAPVDL 118
           QK+A+LGH VTLCD+SSEML L +  I     N+G       +H+P+Q++        DL
Sbjct: 84  QKLAKLGHSVTLCDISSEMLALGQAQITEYENNSGEKLDITLLHAPIQSLTREELGQFDL 143

Query: 119 VLFHAVMEWLAEPKPALQNLLAQVRPGGMVSVMFYNYHGLVYKNAVCGNIPHVLEDMPHR 178
           +L HAV EWL++ K  L  L   ++P G+ S+MFYN   + + + + GN  +V  D   +
Sbjct: 144 ILCHAVAEWLSDAKQTLAGLTQLLKPQGLFSLMFYNKEAMRFHSLISGNFDYVAADFKVK 203

Query: 179 KRFKLQPQKGLLPEEVYQWIEESSFEICGKSGIRCFSDYIGNMKNMGEYQYEDLVALERK 238
           K+  L P   L  ++V  W+ +   E+   SG+R   DY+   +      +  L+ +E +
Sbjct: 204 KKVGLTPSYPLYIDDVRGWVSDWQMELVTASGVRVIHDYLKTHQPPNS-DFSQLLEMELQ 262

Query: 239 FCRQEPYLSLGRYIH 253
           +     Y+ LGRY+H
Sbjct: 263 YSTHPAYIGLGRYVH 277