Pairwise Alignments

Query, 260 a.a., tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., methyltransferase type 11 (RefSeq) from Shewanella sp. ANA-3

 Score =  213 bits (543), Expect = 2e-60
 Identities = 104/251 (41%), Positives = 155/251 (61%), Gaps = 3/251 (1%)

Query: 3   EDRNFDDIAHKFAKNIYGSDKGEIRQVIVWEDLEQLLSQLDTQKVPLHVLDAGGGLAQVS 62
           +D+NFD +A KFAKNIYG+ KGEIR  ++W DL   L+Q   +K  L +LDAGGG    S
Sbjct: 2   QDKNFDKLAQKFAKNIYGTPKGEIRAAVLWRDLAPALAQFGDKK--LRILDAGGGFGYFS 59

Query: 63  QKIARLGHRVTLCDLSSEMLQLAEQDIANNGLLEQYRFVHSPVQTIQAHLDAPVDLVLFH 122
           QK+ARLGH V LCD+S+EML  A+  I  +      R VH+P+Q +        DL+L H
Sbjct: 60  QKLARLGHEVVLCDISAEMLAQAKTQIDASDTPFAIRLVHAPIQALSVAEHGRFDLILCH 119

Query: 123 AVMEWLAEPKPALQNLLAQVRPGGMVSVMFYNYHGLVYKNAVCGNIPHVLEDMPHRKRFK 182
           AV+EWLA+ K  ++ LL  ++P G+ S+MFYN   + +   V GN  +V  D+  +K+ +
Sbjct: 120 AVVEWLADAKTTMEGLLTMLKPNGLFSLMFYNKEAMRFHALVSGNFDYVAADLKVKKKVR 179

Query: 183 LQPQKGLLPEEVYQWIEESSFEICGKSGIRCFSDYIGNMKNMGEYQYEDLVALERKFCRQ 242
           L P   L   +V QW  E + ++  +SG+R   DY+       ++ Y+ L+ +E ++ ++
Sbjct: 180 LTPTHPLYIHDVKQWFAEWNMDLLRESGVRVIHDYL-KKHQPADFDYQKLLTMELEYSQR 238

Query: 243 EPYLSLGRYIH 253
           EPY+SLGRY+H
Sbjct: 239 EPYISLGRYVH 249