Pairwise Alignments

Query, 204 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., transporter, LysE family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 67.8 bits (164), Expect = 1e-16
 Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 10/196 (5%)

Query: 12  DYTLFGPLLAFAFVSTFSPGPNNIMLMTSGANVGFLRTIPHMLGITFGFSIMVLLVGVGL 71
           D+ L    +   F    +PG    + MT G ++G  RT+  MLG   G +++     +G+
Sbjct: 3   DFALLAVFIPTFFFVAITPGMCMTLAMTLGMSIGVRRTLWMMLGELIGVALVATAAVMGV 62

Query: 72  TELFQRYPILQQGLQILCTLYLVYLAV-------KIALSRPSKEGQEYQPMSFVAAALFQ 124
             +   YP + Q  + +  LYL Y+ V       K+A+    K       ++ ++     
Sbjct: 63  ASIMLNYPEVFQIFKWVGGLYLGYIGVQMWRARGKMAILSDDKTNPRVSNLTLISQGFIT 122

Query: 125 WV-NPKGWSMALTAVSVFNPNASWLQLGLIAL--VFALVNLPSVSAWTAAGKQLSYWMNH 181
            + NPKGW+  ++ +  F      +   L+AL  +  +    S+ A+ + GK L  +++ 
Sbjct: 123 AIANPKGWAFMVSLLPPFINAEREVAPQLLALLSIIMVTEFTSMLAYASGGKSLRIFLSR 182

Query: 182 PNYVRWFNGAMGGLLL 197
            + +RW N   G L++
Sbjct: 183 GDNIRWLNRIAGSLMI 198