Pairwise Alignments

Query, 204 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 197 a.a., transporter, LysE family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  156 bits (395), Expect = 2e-43
 Identities = 83/186 (44%), Positives = 115/186 (61%), Gaps = 3/186 (1%)

Query: 22  FAFVSTFSPGPNNIMLMTSGANVGFLRTIPHMLGITFGFSIMVLLVGVGLTELFQRYPIL 81
           FAF S  +PGPNNIMLMTSG N G  R+IPH++GI+ GF  M+L +G+GL+ +FQ YPI+
Sbjct: 10  FAFSSGITPGPNNIMLMTSGVNFGVKRSIPHLMGISLGFPTMILAIGLGLSAVFQAYPII 69

Query: 82  QQGLQILCTLYLVYLAVKIALSRPSKEGQEY-QPMSFVAAALFQWVNPKGWSMALTAVSV 140
            Q ++++  +YL+YL+  IA S    EG+   +P SF+ AA FQWVNPKGW MA+ A++ 
Sbjct: 70  HQVIKVIGIIYLLYLSWLIANSSSKMEGKSIAKPFSFLQAAAFQWVNPKGWIMAVGAIAT 129

Query: 141 FNPNASWL--QLGLIALVFALVNLPSVSAWTAAGKQLSYWMNHPNYVRWFNGAMGGLLLL 198
           F      L  Q+  IA VF  V  P    W   G  L   + +    + FN  M  LL+ 
Sbjct: 130 FTSVQQDLTPQVVTIATVFLCVAFPCAVVWLGFGVALKRILKNERQQKIFNITMAVLLVA 189

Query: 199 SVVPML 204
           S++PM+
Sbjct: 190 SIIPMI 195