Pairwise Alignments

Query, 789 a.a., YgiQ family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

Subject, 759 a.a., uncharacterized radical SAM protein YgiQ from Pseudomonas stutzeri RCH2

 Score =  989 bits (2557), Expect = 0.0
 Identities = 504/769 (65%), Positives = 586/769 (76%), Gaps = 41/769 (5%)

Query: 1   MHSEVTPIHHYKKYWAECFGTAPFLPTSREEMDQLGWDSCDVIIVTGDAYVDHPSFGMAI 60
           MH+ V P+  Y KYWAECFG APFLP SREEMDQLGWDSCD+IIVTGDAYVDHPSFGMAI
Sbjct: 1   MHA-VKPLFDYPKYWAECFGPAPFLPMSREEMDQLGWDSCDIIIVTGDAYVDHPSFGMAI 59

Query: 61  IGRLLEAQGFRVGIIAQPEWQTKDAFMTLGKPNLFFGVTAGNMDSMINRYTADKKIRHDD 120
           IGRLLEAQGFRVGII+QP+W +KD FM LG+PNLFFGV AGNMDSMINRYTAD+K+R DD
Sbjct: 60  IGRLLEAQGFRVGIISQPDWHSKDDFMKLGEPNLFFGVAAGNMDSMINRYTADRKVRSDD 119

Query: 121 AYTPNNKGGMRPDRCSLVYSQRCREAYKDVPIVLGGIEASLRRVAHYDYWSDKVRRSILL 180
           AYT     G RPDR SLVYSQRC+EAYK VP+VLGGIEASLRR+AHYDYWSDKVRRSIL+
Sbjct: 120 AYTAGGLAGKRPDRASLVYSQRCKEAYKHVPVVLGGIEASLRRIAHYDYWSDKVRRSILM 179

Query: 181 DAKADILLFGNAERALVEVAHRLANGESINKMVDIRGTAVNLAQVPEHFKIIDSTRIDQP 240
           DA ADILL+GNAERA+VEVA RLA GE +  + D+RGTA      PE +  IDSTRID+P
Sbjct: 180 DATADILLYGNAERAIVEVAQRLARGEPVEAITDVRGTAFIRKDAPEGWFEIDSTRIDRP 239

Query: 241 NKPFVPSNPYEVETQ----CA---TKG--DEKEEAQPITIRP-SRHDAKTTAVRLPSFEK 290
            K     NPY V TQ    CA    KG  D+  EA+P+ + P  + +   T +RLPSFEK
Sbjct: 240 GKIDKIINPY-VNTQDLSACAIEKDKGPQDDPNEARPVELLPHPKLERDRTVIRLPSFEK 298

Query: 291 LVNDRILYAHASRVLHLETNPYSGRALVQRHGDRELWVNQAPIPLTTEEMDFVFGLYYAR 350
           + ND  LYAHA+RVLHLETNP + RALVQRH DRELW+N  PIPLTTEEMD+VF   YAR
Sbjct: 299 VRNDPALYAHANRVLHLETNPGNARALVQRHDDRELWLNPPPIPLTTEEMDYVFAAPYAR 358

Query: 351 VPHPKYGDAKIPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSQESIINELKEIR 410
           VPHP Y  AKIPAY+MI+ SVNIMRGCFGGC+FCSITEHEGRIIQ+RS ESI++E++E++
Sbjct: 359 VPHPAYNGAKIPAYEMIRFSVNIMRGCFGGCTFCSITEHEGRIIQSRSHESILHEIEEMK 418

Query: 411 DKVPGFTGVISDLGGPTANMYRLGCSDPKAEANCRRPSCVFPGICHKLNTDHKHTIDLYR 470
           + VPGFTGV+SDLGGPTANMYRL C   + E +CR+PSCVFPGIC  LNTDH   I+LYR
Sbjct: 419 N-VPGFTGVVSDLGGPTANMYRLACKSHEIEKHCRKPSCVFPGICENLNTDHSSLIELYR 477

Query: 471 AARDVDGIKKVVIASGVRYDLAIESPEYVRELVTHHVGGYLKIAPEHTEKGPLSMMMKPG 530
            AR + G+KK++IASG+RYDLA+ESPEYV+ELVTHHVGGYLKIAPEHTE+GPL  MMKPG
Sbjct: 478 KARALPGVKKILIASGLRYDLAVESPEYVKELVTHHVGGYLKIAPEHTERGPLDKMMKPG 537

Query: 531 MGTYDRFKELFEKYSAEAGKKQYLIPYFIAAHPGTEDEDMVNLALWLKSNNYRCDQVQNF 590
           +G+YDRFK +FEKYS EAGK+QYLIPYFIAAHPGT DEDM+NLALWLK+N +R DQVQ F
Sbjct: 538 IGSYDRFKRMFEKYSKEAGKEQYLIPYFIAAHPGTTDEDMMNLALWLKANGFRADQVQAF 597

Query: 591 YPSPMCNATAMYHAEVNPLKRVKYKKPEKVPVAKGEAQRRLHKALLRYHDPANWPMIREA 650
           YPSPM +ATAMYH   NPL++V YK  E V V K E QRRLHKA LRYHDP  WP++REA
Sbjct: 598 YPSPMASATAMYHTGKNPLRKVTYKS-EGVTVVKSEEQRRLHKAFLRYHDPKGWPLLREA 656

Query: 651 LIAMGKRHLIGDRPECLIP-------------EKDSDLVTPAQSRKSGRHGANRFATKH- 696
           LI MG+  LIG+    LIP              K+S   TP  S+K+G+ G  +  T+H 
Sbjct: 657 LIRMGRADLIGNGKHQLIPAHQPATEGYQSARRKNS---TPVGSKKTGQGG--KILTQHN 711

Query: 697 -----THSQPGFDALRGNKSGGQGRPNSGNKSNQGKPAGSKPTGSKPTA 740
                +H    +D     K+  + R  +      GKPAG      +P A
Sbjct: 712 GLPPRSHDGNAWDKREQAKAAAEARRKA---EKSGKPAGKGGKPQRPVA 757