Pairwise Alignments

Query, 789 a.a., YgiQ family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

Subject, 769 a.a., Radical SAM from Pseudomonas syringae pv. syringae B728a

 Score =  986 bits (2549), Expect = 0.0
 Identities = 499/765 (65%), Positives = 579/765 (75%), Gaps = 33/765 (4%)

Query: 7   PIHHYKKYWAECFGTAPFLPTSREEMDQLGWDSCDVIIVTGDAYVDHPSFGMAIIGRLLE 66
           P+  Y KYWAECFG APFLP SREEMD LGWDSCD+IIVTGDAYVDHPSFGMAIIGRLLE
Sbjct: 6   PLFDYPKYWAECFGPAPFLPMSREEMDLLGWDSCDIIIVTGDAYVDHPSFGMAIIGRLLE 65

Query: 67  AQGFRVGIIAQPEWQTKDAFMTLGKPNLFFGVTAGNMDSMINRYTADKKIRHDDAYTPNN 126
           +QGFRVGIIAQP+WQ+KD FM LG+PNLFFGV AGNMDSMINRYTADKKIR DDAYTP  
Sbjct: 66  SQGFRVGIIAQPDWQSKDDFMKLGEPNLFFGVAAGNMDSMINRYTADKKIRSDDAYTPGG 125

Query: 127 KGGMRPDRCSLVYSQRCREAYKDVPIVLGGIEASLRRVAHYDYWSDKVRRSILLDAKADI 186
             G RPDR SLVYSQRC+EAYK VPIVLGGIEASLRR+AHYDYW DKVR SIL+DA ADI
Sbjct: 126 MAGKRPDRASLVYSQRCKEAYKHVPIVLGGIEASLRRIAHYDYWQDKVRNSILIDACADI 185

Query: 187 LLFGNAERALVEVAHRLANGESINKMVDIRGTAVNLAQVPEHFKIIDSTRIDQPNKPFVP 246
           LL+GNAERA+VEVA RL+ G  I  + D+RGTA      P+ +  +DSTRID+P K    
Sbjct: 186 LLYGNAERAIVEVAQRLSYGHKIEDITDVRGTAFIRRDTPQGWYEVDSTRIDRPGKVDKI 245

Query: 247 SNPYEVETQ----CAT---KG--DEKEEAQPITIRPS-RHDAKTTAVRLPSFEKLVNDRI 296
            NPY V TQ    CA    KG  ++  EA+ + I  S R     T +RLPS EK+ ND +
Sbjct: 246 INPY-VNTQDTQACAIEQEKGNVEDPNEAKVVQILASPRMTRDKTVIRLPSVEKVRNDAV 304

Query: 297 LYAHASRVLHLETNPYSGRALVQRHGDRELWVNQAPIPLTTEEMDFVFGLYYARVPHPKY 356
           LYAHA+RVLHLETNP + RALVQ+HGD ++W N  PIP+TTEEMD+VFG+ YARVPHP Y
Sbjct: 305 LYAHANRVLHLETNPGNARALVQKHGDVDVWFNPPPIPMTTEEMDYVFGMPYARVPHPAY 364

Query: 357 GDAKIPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSQESIINELKEIRDKVPGF 416
           G  KIPAYDMI+ SVNIMRGCFGGC+FCSITEHEGRIIQNRS+ESII E++EIRDKVPGF
Sbjct: 365 GKEKIPAYDMIRFSVNIMRGCFGGCTFCSITEHEGRIIQNRSEESIIREIEEIRDKVPGF 424

Query: 417 TGVISDLGGPTANMYRLGCSDPKAEANCRRPSCVFPGICHKLNTDHKHTIDLYRAARDVD 476
           TGVISDLGGPTANMYR+ C  P+ E+ CR+PSCVFPGIC  LNTDH   I LYR+AR + 
Sbjct: 425 TGVISDLGGPTANMYRIACKSPEIESACRKPSCVFPGICPNLNTDHSSLIQLYRSARALP 484

Query: 477 GIKKVVIASGVRYDLAIESPEYVRELVTHHVGGYLKIAPEHTEKGPLSMMMKPGMGTYDR 536
           G+KK++IASG+RYDLA+ESPEYV+ELVTHHVGGYLKIAPEHTE+GPL+ MMKPG+G+YD+
Sbjct: 485 GVKKILIASGLRYDLAVESPEYVKELVTHHVGGYLKIAPEHTEEGPLNQMMKPGIGSYDK 544

Query: 537 FKELFEKYSAEAGKKQYLIPYFIAAHPGTEDEDMVNLALWLKSNNYRCDQVQNFYPSPMC 596
           FK +FEKY+ EAGK+QYLIPYFIAAHPGT DEDM+NLALWLK N +R DQVQ FYPSPM 
Sbjct: 545 FKRMFEKYTKEAGKEQYLIPYFIAAHPGTTDEDMMNLALWLKGNGFRADQVQAFYPSPMA 604

Query: 597 NATAMYHAEVNPLKRVKYKKPEKVPVAKGEAQRRLHKALLRYHDPANWPMIREALIAMGK 656
            ATAMYH+  NPL++V YK  + V + K EAQRRLHKA LRYHDP  WPM+REAL  MG+
Sbjct: 605 TATAMYHSGKNPLRKVTYKS-DAVTIVKSEAQRRLHKAFLRYHDPKGWPMLREALERMGR 663

Query: 657 RHLIGDRPECLIP--EKDSDLVTPAQSRKSGRHGANRFA---------TKHTHSQP---- 701
             LIG   + LIP  +  +D    A+ + S   G+++ A         T+HT   P    
Sbjct: 664 ADLIGPGKDQLIPLHQPATDSYQSARRKNSTPAGSHKVAKNAKTTLIQTQHTGLPPRGSD 723

Query: 702 ---GFDALRGNKSGGQGRPNSGNKSNQGKPAGSKPTGSKPTANKP 743
               +D     K+    R     K        +K  G+KP   KP
Sbjct: 724 GSKPWDKREEAKAAAMARNKQAAKERMD---AAKGKGTKPPKRKP 765