Pairwise Alignments

Query, 789 a.a., YgiQ family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

Subject, 781 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  979 bits (2531), Expect = 0.0
 Identities = 505/799 (63%), Positives = 586/799 (73%), Gaps = 43/799 (5%)

Query: 1   MHSEVTPIHHYKKYWAECFGTAPFLPTSREEMDQLGWDSCDVIIVTGDAYVDHPSFGMAI 60
           M  E T   H  KYWAE FGTAPFLP SR+EM++LGWDSCD+IIVTGDAYVDHPSFGMA+
Sbjct: 1   MQVESTLFSH-PKYWAESFGTAPFLPMSRKEMEKLGWDSCDIIIVTGDAYVDHPSFGMAV 59

Query: 61  IGRLLEAQGFRVGIIAQPEWQTKDAFMTLGKPNLFFGVTAGNMDSMINRYTADKKIRHDD 120
           IGR+LEAQG+RVGII+QP+W +KDAFM LG+PNLFFGVTAGNMDSMINRYTAD++IR DD
Sbjct: 60  IGRMLEAQGYRVGIISQPDWSSKDAFMQLGRPNLFFGVTAGNMDSMINRYTADRRIRSDD 119

Query: 121 AYTPNNKGGMRPDRCSLVYSQRCREAYKDVPIVLGGIEASLRRVAHYDYWSDKVRRSILL 180
           AYTP + GG RPDR   VY+QRC+EA+KDVP+++GGIEASLRR+AHYDYWSDKVRRS++ 
Sbjct: 120 AYTPGDVGGKRPDRAVTVYTQRCKEAFKDVPVIIGGIEASLRRIAHYDYWSDKVRRSVIF 179

Query: 181 DAKADILLFGNAERALVEVAHRLANGESINKMVDIRGTAVNLAQVPEHFKIIDSTRIDQP 240
           DAKADIL++GNAER L EVA RLA GE+I  + D+RGTAV   +    ++ +DS +IDQ 
Sbjct: 180 DAKADILMYGNAERPLAEVARRLAAGEAIGDIQDVRGTAVIRKEPMPEWRGMDSRKIDQL 239

Query: 241 NKPFVPSNPYEVE-TQCAT-------KGDEKEEAQPITIRPSRHDA-KTTAVRLPSFEKL 291
           +K     NPY  +   CA        K  + +  +PI+++P R      T V LP+FEK+
Sbjct: 240 HKIDPIPNPYGADDVGCANLSGPSDVKIFDNDAPKPISVQPPRPKPWDKTYVLLPAFEKV 299

Query: 292 VNDRILYAHASRVLHLETNPYSGRALVQRHGDRELWVNQAPIPLTTEEMDFVFGLYYARV 351
             D+ LYAHASR+LH E NP   RAL Q HGDR +WVN    PL T+EMD VF L Y RV
Sbjct: 300 SEDKYLYAHASRILHQEQNPGCARALFQPHGDRGVWVNPPAWPLNTDEMDAVFDLPYKRV 359

Query: 352 PHPKYGDAKIPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSQESIINELKEIRD 411
           PHP YG  KIPAYDMIKTS+NIMRGCFGGCSFCSITEHEGRIIQ+RSQESII E+K+I+D
Sbjct: 360 PHPAYGKDKIPAYDMIKTSINIMRGCFGGCSFCSITEHEGRIIQSRSQESIIKEIKDIQD 419

Query: 412 KVPGFTGVISDLGGPTANMYRLGCSDPKAEANCRRPSCVFPGICHKLNTDHKHTIDLYRA 471
           KVPGFTGVISDLGGPTANMYRLGC+  KAE  CRR SCV+P IC  L TDHKHTIDLYRA
Sbjct: 420 KVPGFTGVISDLGGPTANMYRLGCTSEKAEKTCRRLSCVYPSICGHLGTDHKHTIDLYRA 479

Query: 472 ARDVDGIKKVVIASGVRYDLAIESPEYVRELVTHHVGGYLKIAPEHTEKGPLSMMMKPGM 531
           AR V GIKK++IASGVRYDLAIE P YV+ELV HHVGGYLKIAPEHTE+GPLS MMKPGM
Sbjct: 480 ARAVPGIKKILIASGVRYDLAIEDPAYVKELVQHHVGGYLKIAPEHTEEGPLSKMMKPGM 539

Query: 532 GTYDRFKELFEKYSAEAGKKQYLIPYFIAAHPGTEDEDMVNLALWLKSNNYRCDQVQNFY 591
           G YD+FKELF+KYS EAGK+Q+LIPYFI+AHPGT DEDM+NLALWLK   ++ DQVQNFY
Sbjct: 540 GAYDKFKELFDKYSKEAGKEQFLIPYFISAHPGTTDEDMLNLALWLKERKFKLDQVQNFY 599

Query: 592 PSPMCNATAMYHAEVNPLKRVKYKKPEKVPVAKGEAQRRLHKALLRYHDPANWPMIREAL 651
           PSPM NAT +YH E+N LK VK+   E VPV K   QRRLHKALLRYHDPA WP+IRE L
Sbjct: 600 PSPMANATTIYHTELNSLKNVKHTS-EVVPVPKKGRQRRLHKALLRYHDPAGWPIIREGL 658

Query: 652 IAMGKRHLIGDRPECLIPEKDSDLVTPAQSRKSGRHGANRFATKHTHSQPGFDALRGNK- 710
           IAMG+  LIG+ P  L+P +             GR+   +   K        DA +G K 
Sbjct: 659 IAMGREDLIGNSPNHLVPPE-------------GRNERGQKWMK--------DANQGQKA 697

Query: 711 ----SGGQGRPNSGNKSNQGKPAGSKPTGSKPTANKPAGNQSARSEQNR----GQQGQRG 762
               SG Q     G    +GKP+ SKP G K  AN     Q   S        GQ G +G
Sbjct: 698 LTRFSGNQFDERKGKGDAKGKPSASKPKGPKSGANATQSQQPKSSRPGAKAPFGQSGFKG 757

Query: 763 SATGGKP--QGSGRPASRG 779
            +  GK   QG G  AS G
Sbjct: 758 KSEQGKAGHQGRGNKASSG 776