Pairwise Alignments

Query, 818 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 946 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  187 bits (476), Expect = 2e-51
 Identities = 155/550 (28%), Positives = 259/550 (47%), Gaps = 28/550 (5%)

Query: 131 LFDNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHSQHFYVDMWQQ 190
           +F+    G+VI D    +LA N+ F + TG+  +++LG         + ++  Y  + Q 
Sbjct: 396 VFEAASEGIVIFDPHYVLLAANQAFTRVTGFNIDDMLGRNVVDLPCSRDARRHYPVIRQA 455

Query: 191 LREQGGWSGTILSQRASGEVWPQDLSIKRLSPQKGQIFYI-GFTTDLAPHLD-RVLDKQA 248
           L++ G W G ++  RA+GE++PQ L +  +   +G + +I GF  DL+   +     +  
Sbjct: 456 LKQHGTWQGELVEARANGELYPQWLQLNVVRNARGNVSHIVGFFADLSARRESEERMRYL 515

Query: 249 GDVELLTQLPTLSKFSDQLKQRLPKQQTTTGFVLAI------QPKFSSDKYYAQI----- 297
              + LT L   S F ++L +   + +      LA+      + K  +D     I     
Sbjct: 516 THYDELTGLANRSLFRERLHEAHQRVRQGGRRSLALLHINLDRFKLLNDSLGHDIADQLL 575

Query: 298 ----RRLAASLAQNRQV-QLCGYHGEGIFLCQLDAEKNLEAQPLVGLQRTLRQFFIELRQ 352
               RRL  +L +   + +L G      F    DA  NL +     L R   +   +LR 
Sbjct: 576 QKMARRLINALPEADTIARLSGDE----FAVLFDAYGNLSS-----LARVATRLAAKLRV 626

Query: 353 RGGQEAHQAVAKGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRHINFYDRAIHQQI 412
               E H+ V    +G+S+L  +T ++  LV  A  AM         +  FY  ++    
Sbjct: 627 PLTIEGHELVLSASIGISLLPDNTREVAMLVSQANMAMQHAKHLGGNNFQFYTDSLQAST 686

Query: 413 ERRKTLEKWVQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPELLHASTQELISIA 472
             R  LE  ++K +    ++VFYQP +   +  +   EAL R+  P +      + I +A
Sbjct: 687 LERLQLENQLRKALEEQQLKVFYQPKLCLATGRLNAAEALVRWDHPAMGRVPPGDFIGLA 746

Query: 473 EDLGLINQLDELIGGKALKDLPKIHALFGHHVGVSINRSLNSDLSAEQILQSVVDMLAET 532
           E+ GLI  + E +  +A     +        + VS+N S++  L   +++  V  +L ET
Sbjct: 747 EETGLIGPIGEFVLRQACWQACEWQRQGLAPIRVSVNLSVHQ-LRQGKLVSLVRQVLEET 805

Query: 533 PTLAKNITVELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSSFSYLTECQFDYL 592
               + + +ELTE+   DS        Q LR+ GV +AIDDFGTG+SS SYL     DY+
Sbjct: 806 GLAPQYLELELTESQLLDSVEHIIATFQQLRDLGVKLAIDDFGTGYSSLSYLKRIPVDYV 865

Query: 593 KIDREFVTNIEVGSRRYAIVKMVTDLAHTLGVKVVAEGVETEHEVYVLKSLGVDLLQGFF 652
           KID+ F+  +  GS   AI + +  +AH L +KVVAEGVE + ++  L+S   D +QG+ 
Sbjct: 866 KIDQAFIRGLGEGSVDAAITRAIIAMAHGLSLKVVAEGVERQEQLEFLRSERCDEVQGYL 925

Query: 653 FAKPLPLSNL 662
            ++P+    L
Sbjct: 926 VSRPVEAEGL 935