Pairwise Alignments

Query, 818 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score =  192 bits (489), Expect = 6e-53
 Identities = 152/537 (28%), Positives = 252/537 (46%), Gaps = 15/537 (2%)

Query: 133 DNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHSQHFYVDMWQQLR 192
           +N    ++IT  +  I   N  FE  TGY  +E++G       SG  S  FY D+W+ + 
Sbjct: 367 ENSPASILITSAEGIIEYVNPAFELMTGYGADEVIGKNPRFLKSGLMSPSFYQDLWETIT 426

Query: 193 EQGGWSGTILSQRASGEVWPQDLSIKRLSPQKGQIF-YIGFTTDLAPHLDR--VLDKQAG 249
               W G + ++R +GE++    SI  +    GQI  ++    D+        +LD QA 
Sbjct: 427 AGETWRGELYNRRKTGELFWDRTSISPVKDLAGQIIHFVAVKEDITEQKRNRELLDHQA- 485

Query: 250 DVELLTQLPTLSKFSDQLKQRLPKQQTTTGFVLAIQPKFSSDKYYAQIRRLAAS----LA 305
           + + LT LP  S   D+L+Q     + +   V+ +      D++      L  S    L 
Sbjct: 486 NYDSLTDLPNRSLALDRLRQATALSERSNDTVIVML--LDLDRFKNINDTLGHSYGDCLL 543

Query: 306 QNRQVQLCGYHGEGIFLCQLDAEKNLEAQPLVG----LQRTLRQFFIELRQRGGQEAHQA 361
           Q    +L  +    I + +L  ++ L   P V     L++  +Q    + Q    EA + 
Sbjct: 544 QEIAKRLRYHLPREITISRLGGDEFLIICPAVKENIHLEKLSQQLLKIISQPITIEAEEL 603

Query: 362 VAKGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRHINFYDRAIHQQIERRKTLEKW 421
           V    +GV+    D    E L+ +A  AM             +   ++ +   R  LE  
Sbjct: 604 VITASIGVACYPNDGVTPEVLMRNADTAMYSAKRNGGNDFQLFMPTMNAEAHARIQLETH 663

Query: 422 VQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPELLHASTQELISIAEDLGLINQL 481
           ++  +    ++VFYQPI+  Q   VV  EAL R+  PEL +      I IAE+ GLI  L
Sbjct: 664 LRHALEQYQLKVFYQPIISLQDNHVVGLEALARWHDPELGNIPPDRFIPIAEETGLIIPL 723

Query: 482 DELIGGKALKDLPKIHALFGHHVGVSINRSLNSDLSAEQILQSVVDMLAETPTLAKNITV 541
              +  +A +D+      + +   V++N S    L + +  Q    +L         + +
Sbjct: 724 GYRVIEQACQDVAIWQQKYNYPFWVAVNLSPRQ-LRSNRFTQITAKILQRHNFRPNYLKL 782

Query: 542 ELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSSFSYLTECQFDYLKIDREFVTN 601
           E+TE    D+ S   ++L  L  +G+ +A+DDFGTG+S+ SYL    F  LK+D+ F+ +
Sbjct: 783 EVTEQMLLDNTSTIAQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQSLKVDQSFLRD 842

Query: 602 IEVGSRRYAIVKMVTDLAHTLGVKVVAEGVETEHEVYVLKSLGVDLLQGFFFAKPLP 658
           I   +   A+VK +  +AH LG++ VAEGVET  +V  LK++G +  QG++F++PLP
Sbjct: 843 IPHSTESCALVKTIVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQGYWFSRPLP 899