Pairwise Alignments

Query, 818 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1069 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  227 bits (578), Expect = 3e-63
 Identities = 154/555 (27%), Positives = 272/555 (49%), Gaps = 18/555 (3%)

Query: 130  ALFDNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHSQHFYVDMWQ 189
            A+F+    G+++TD    I   N  F Q TGY   E+ G   S+ +S ++  H Y  MW+
Sbjct: 509  AVFEYSAEGIMVTDADNHIELINPAFSQITGYSIEEVKGRNPSILSSHRNPPHLYDAMWE 568

Query: 190  QLREQGGWSGTILSQRASGEVWPQDLSIKRLSPQKGQIFY-IGFTTDLAPHLDRVLDK-Q 247
             LR  G W G I ++R  GEV+P+ L+I  +   +GQI + IG   D++       D   
Sbjct: 569  SLRSTGKWEGEIWNRRKDGEVYPEYLAITLVRDDEGQIVHHIGLFMDISRRKQYEQDIWY 628

Query: 248  AGDVELLTQLPTLSKFSDQLKQRLPKQQTTTGFVLAIQP------KFSSDKYYAQIRRLA 301
              + + LT LP     S++L   L K     G  LA+        K+ +D        L 
Sbjct: 629  KANFDTLTDLPNRKLLSERLGHEL-KMAEHDGRKLAVMVLDLDRFKYINDTQGHDCGDLL 687

Query: 302  ASLAQNRQVQLCGYHGEGIFLCQLDAEKNLEAQPLVGLQRTLRQFFIELRQRGGQ----E 357
                  R   L    G   F+ +L  ++ +   P +  +  + Q+   L Q  G     E
Sbjct: 688  LKAVAKR---LQTVMGSTDFIARLGGDEFVIVLPRLAQEHAVEQYAKRLLQSMGDPFKVE 744

Query: 358  AHQAVAKGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRHINFYDRAIHQQIERRKT 417
                     LG+ +   D   +E L+ +A  AM         H  ++ + ++  +  R  
Sbjct: 745  QGSMSVSASLGIGLYPQDGLDVETLLSNAETAMYGAKDEGRNHFKYFTQEMNLALIERLG 804

Query: 418  LEKWVQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPELLHASTQELISIAEDLGL 477
            +E+ +++ +AN +  +FYQP+VD +S  V   EAL R+Q PE    S    I +AED+GL
Sbjct: 805  MERDLRRAVANDEFCLFYQPVVDMESGEVTSLEALLRWQDPEQGLVSPVRFIPVAEDMGL 864

Query: 478  INQLDELIGGKALKDLPKIHAL-FGHHVGVSINRSLNSDLSAEQILQSVVDMLAETPTLA 536
            + +L + +  KAL DL ++H L FG  + ++++ +       + + + +   L+      
Sbjct: 865  MGELGQWVMDKALADLARLHTLGFGLSMAINVS-ACQCHCKRQSLDEQLRSALSRHGIAP 923

Query: 537  KNITVELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSSFSYLTECQFDYLKIDR 596
            +++ VE+TE+   D+     + L ++R+ G  + +DDFGTG+SS SYL +     +KID+
Sbjct: 924  RHLHVEITESLLLDNSHHCLDTLNNIRDLGCAIYLDDFGTGYSSLSYLKKFPISAIKIDK 983

Query: 597  EFVTNIEVGSRRYAIVKMVTDLAHTLGVKVVAEGVETEHEVYVLKSLGVDLLQGFFFAKP 656
             FV  +       ++V+ + +++ +LG+K+VAEG+E++ +   L++LG    QG+ +++P
Sbjct: 984  SFVEQLPGCESDASLVRAIVNMSKSLGMKLVAEGIESKDQQAFLQALGSQFGQGYLYSRP 1043

Query: 657  LPLSNLIHASDYRKH 671
            LP   L+   +  +H
Sbjct: 1044 LPFEELLPWLERHQH 1058