Pairwise Alignments

Query, 818 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1301 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

 Score =  184 bits (468), Expect = 2e-50
 Identities = 152/549 (27%), Positives = 254/549 (46%), Gaps = 24/549 (4%)

Query: 130  ALFDNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHSQHFYVDMWQ 189
            A+F N   G+ +TD +  ILA N  F Q T Y+  E+LG    +  SG+ ++ FYV +WQ
Sbjct: 754  AVFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAAEVLGRNARILQSGRQNREFYVALWQ 813

Query: 190  QLREQGGWSGTILSQRASGEVWPQDLSIKRLSPQKGQIF-YIGFTTDLAPHLDRVLDKQA 248
             +   G W G I ++R  GEV+P+ LSI  +   +G++  YIG  +DL+    R+   +A
Sbjct: 814  DVLTIGSWRGEIWNRRRDGEVFPEWLSISSVRNHQGEVTNYIGIFSDLS----RIKHSEA 869

Query: 249  GDVEL-----LTQLPTLSKFSDQLKQRLPKQQTTTGFVLAIQPKFSSDKYYAQI--RRLA 301
                L     LT LP       +L   + + + T G    +       K        R  
Sbjct: 870  KFHHLAHHDPLTGLPNRLLLRSRLDHAIERARRTGGRCAVLFLDLDRFKMINDSLGHRAG 929

Query: 302  ASLAQNRQVQLCGYHGEGIFLCQLDAEK------NLEAQPLVGLQRTLRQFFIELRQRGG 355
             +L +    +L    G+   L +L  ++      +++  P VG   T+    +E  +   
Sbjct: 930  DTLLRTLGARLTACLGDTGTLARLGGDEFVAVIEDIDGIPAVG---TIALTMLERLREPC 986

Query: 356  Q--EAHQAVAKGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRHINFYDRAIHQQIE 413
            +  E  +    G +G+S+   D D  + L+ HA  A+ +          FY R + ++I 
Sbjct: 987  RLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHADTALGQVKGAGGGAYGFYTRTLTERIS 1046

Query: 414  RRKTLEKWVQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPELLHASTQELISIAE 473
             R  LE  ++  +  GD  + YQP++   +  V   EAL R+   + L       I +AE
Sbjct: 1047 ARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVEGVEALVRWAGGDGLLIPPDRFIPLAE 1106

Query: 474  DLGLINQLDELIGGKALKDLPKIHALFGHHVGVSINRSLNSDLSAEQILQSVVDMLAETP 533
            D GLI  L E + G+A + + +  +       +++N S         I   V  +L +T 
Sbjct: 1107 DTGLIVPLGEWVLGEACRTMQRWRSQGMPLTVLAVNLSPRQ-FRDHAIPALVRRVLEQTG 1165

Query: 534  TLAKNITVELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSSFSYLTECQFDYLK 593
              A  + +E+TE+A  +  +     +  L++ GV +AIDDFGTG+SS + L     D +K
Sbjct: 1166 LPASVLELEITESAIMEQGAAAEAQMTGLKHLGVRLAIDDFGTGYSSLANLRRFPIDKIK 1225

Query: 594  IDREFVTNIEVGSRRYAIVKMVTDLAHTLGVKVVAEGVETEHEVYVLKSLGVDLLQGFFF 653
            ID+ FV +I   +    I   +  +  TL + V+AEGVET  ++  L     D  QG+ F
Sbjct: 1226 IDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLAEGVETTDQLDFLSRKQCDSAQGYLF 1285

Query: 654  AKPLPLSNL 662
            ++P+  + L
Sbjct: 1286 SRPITAAAL 1294