Pairwise Alignments

Query, 818 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1010 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  198 bits (503), Expect = 1e-54
 Identities = 148/551 (26%), Positives = 252/551 (45%), Gaps = 34/551 (6%)

Query: 130 ALFDNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHSQHFYVDMWQ 189
           ++++N    + + D +  I+  N  F   TGY Q E L     +  S +  +  Y +M  
Sbjct: 460 SVYNNSSEAMSVQDHKGHIITINAAFTAITGYSQEEALTQNIRILQSSRTPRSQYDEMNS 519

Query: 190 QLREQGGWSGTILSQRASGEVWPQDLSIKRLSPQKGQIFY-IGFTTDLAP--HLDRVLDK 246
            +R+ G W G +  +  SGE +   L+I  +  Q GQ++  +   +D+      + ++ K
Sbjct: 520 AIRDTGYWQGELWIKNKSGEEYMVWLTINTIFDQHGQVYRRVALFSDITEKKEAEHIIWK 579

Query: 247 QAGDVELLTQLPTLSKFSDQLKQRLPK-QQTTTGFVLAIQPKFSSDKYYAQI-------- 297
           QA + + LT LP      + L   + +  +  + F L     F    ++ ++        
Sbjct: 580 QA-NYDPLTGLPNRRMLLEYLNTEILRIDRNHSHFALM----FLDLDFFKEVNDTLGHDM 634

Query: 298 ---------RRLAASLAQNRQVQLCGYHGEGIFLCQLDAEKNLEAQPLVGLQRTLRQFFI 348
                    +RL   + ++  V   G     + L  +D+   +E      L+R    + +
Sbjct: 635 GDLLLQETAKRLKGCIRESDVVARLGGDEFTVVLSGIDSPSGVERVAQSILERIAEPYSL 694

Query: 349 ELRQRGGQEAHQAVAKGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRHINFYDRAI 408
                 G E   A     +G+++   D   IE L+ HA QAM           +++  ++
Sbjct: 695 ------GDET--AYISASIGITIYPDDATSIEGLLKHADQAMYAAKEQGRNRFHYFTPSM 746

Query: 409 HQQIERRKTLEKWVQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPELLHASTQEL 468
            +    R  L K ++  I   + E+FYQPIVD     V K EAL R+  P+    S  E 
Sbjct: 747 QEYARYRMALIKDLRNAINRKEFELFYQPIVDMNKLGVYKAEALIRWVHPQRGLVSPGEF 806

Query: 469 ISIAEDLGLINQLDELIGGKALKDLPKIHALFGHHVGVSINRSLNSDLSAEQILQSVVDM 528
           I +AE+ GLIN++   +  KA +   +     G  + +SIN+S              + +
Sbjct: 807 IPVAEETGLINEIGNWVFEKAAQQSARWRTQHGVEIQISINKSPIQFRDEGDTFSDWLAL 866

Query: 529 LAETPTLAKNITVELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSSFSYLTECQ 588
           L      +  I VE+TE    D+     + L   R+ G+ V++DDFGTG+SS +YL +  
Sbjct: 867 LRHLELSSNAICVEITEGLLLDASMGVTDKLLAYRDAGIQVSLDDFGTGYSSLAYLKKFD 926

Query: 589 FDYLKIDREFVTNIEVGSRRYAIVKMVTDLAHTLGVKVVAEGVETEHEVYVLKSLGVDLL 648
            DYLKID+ F  N+E  S   A+ + +  +AH LG+KV+AEGVET+ +  +L S G D  
Sbjct: 927 IDYLKIDQSFTRNLESDSDGVALCEAIIVMAHKLGIKVIAEGVETQFQHDILASAGCDFA 986

Query: 649 QGFFFAKPLPL 659
           QG+ ++KP+ L
Sbjct: 987 QGYLYSKPVSL 997