Pairwise Alignments

Query, 818 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 974 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  203 bits (517), Expect = 3e-56
 Identities = 159/558 (28%), Positives = 260/558 (46%), Gaps = 47/558 (8%)

Query: 130 ALFDNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHSQHFYVDMWQ 189
           ++ +     V +TD + RIL  NR F   TGY   E+ G       SG+H + FYV++W+
Sbjct: 410 SVLEQSREAVFVTDAENRILLVNRAFVAVTGYTLEEVRGRTPRFLQSGRHDEAFYVNLWR 469

Query: 190 QLREQGGWSGTILSQRASGEVWPQDLSIKRLSPQKGQIF-YIGFTTDLAPHLDRVLDKQA 248
            LRE G W G I  +   G + PQ  +I  ++   G +  YI   +DL  H      K A
Sbjct: 470 SLRETGHWQGEIWDRAKDGRIHPQWAAISAVADAAGTVSNYIAIYSDLTEH------KAA 523

Query: 249 GD-VELLTQLPTLSKFSDQLKQRLPKQQTTTGFVLAIQPKFSSDKYYAQIRRLAA---SL 304
            D ++ L Q   L+   +++   L + + T     A +        +  + R      SL
Sbjct: 524 QDRIQFLAQHDPLTGLPNRM---LLQDRLTVAIAAAAREGHEVGVLFIDLDRFKTINDSL 580

Query: 305 AQNRQVQLCGYHGEGIFLCQLDAEKNLEAQPLVGLQRTLRQFFIELRQ--RGGQEAHQAV 362
             +   +L     +G+     DA +  +    +G      +F + L +  R    AH A 
Sbjct: 581 GHSVGDELI----KGVTKRLQDAVRESDTVSRLGGD----EFIVVLHRIRRSEDAAHVAD 632

Query: 363 A------------------KGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRHINFY 404
           A                     +G+SV   D +  E L+ +A  AM         +  F+
Sbjct: 633 AVLAQLTAPFNIAGKELRVTASIGISVFPADGEDEEGLIKNADTAMFHAKERGRNNYQFF 692

Query: 405 DRAIHQQIERRKTLEKWVQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPELLHAS 464
              ++ +   R  LE  ++  +   +  +FYQP V+ +S  +V  EAL R++  +    S
Sbjct: 693 RPEMNARAGERLALENSLRGAVQRKEFVLFYQPQVEIRSGRLVGAEALIRWRRGDSGFVS 752

Query: 465 TQELISIAEDLGLINQLDELIGGKALKDLPKIH----ALFGHHVGVSINRSLNSDLSAEQ 520
             + I +AE+ G I ++ + +  +A +   +      A+    V V++N S +     + 
Sbjct: 753 PADFIPLAEETGTILEIGDWVLAEACRQQVQWDQQWPAMGLKPVPVAVNLS-SLQFRQKH 811

Query: 521 ILQSVVDMLAETPTLAKNITVELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSS 580
             ++++D++ + P  A  I +ELTE+   +   Q G VL  L+  G+ ++IDDFGTG+SS
Sbjct: 812 FKENLLDIVGDYPLPAGRIELELTESIVMEEPEQVGAVLAELKQAGLRLSIDDFGTGYSS 871

Query: 581 FSYLTECQFDYLKIDREFVTNIEVGSRRYAIVKMVTDLAHTLGVKVVAEGVETEHEVYVL 640
            SYL     D LKID  FV +I   S   AIV  V  L H+LG+KVVAEGVE E E+ +L
Sbjct: 872 LSYLKRFPLDKLKIDASFVRDIVNDSADLAIVHAVVSLGHSLGLKVVAEGVEHEAELLIL 931

Query: 641 KSLGVDLLQGFFFAKPLP 658
            ++G D+ QG+ F +P+P
Sbjct: 932 NAMGCDIAQGYHFCRPVP 949