Pairwise Alignments

Query, 818 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1281 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  204 bits (518), Expect = 3e-56
 Identities = 164/550 (29%), Positives = 270/550 (49%), Gaps = 28/550 (5%)

Query: 129  DALFDNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHSQHFYVDMW 188
            + +F N    ++I D   RI++ NR F   TGY Q E+LG    M  SG+H + FY  MW
Sbjct: 728  EKVFANSPEAIMICDQGNRIISVNRAFCDITGYAQEEVLGQDPRMLASGRHDKDFYRQMW 787

Query: 189  QQLREQGGWSGTILSQRASGEVWPQDLSIKRL-SPQKGQI-FYIGFTTDLAPHLD-RVLD 245
            + LR+ G W+G I  +R +GE++P+ ++I  +   Q G +  YI   +D+    +     
Sbjct: 788  EILRDTGAWAGEIWDRRKNGEIYPKWMTINAVHDTQSGALTHYITLFSDITERKETEARI 847

Query: 246  KQAGDVELLTQLPTLSKFSDQLKQRLPKQQTTTGFVLAIQ----PKFSS----------D 291
                  + LT LP       +L+Q L   +   G  +A+      +F +          D
Sbjct: 848  HHLAHHDPLTGLPNRFTLEARLEQSLADARRH-GHKVAVMFMDLDRFKTINDSLGHAVGD 906

Query: 292  KYYAQI-RRLAASLAQNRQVQLCGYHGEGIFLCQLDAEKNLEAQPLVGLQRTLRQFFIEL 350
                +I  RL +++ ++  V   G  G+   +   D E   +A  + G  + +      L
Sbjct: 907  SLLMEIAHRLRSAVRESDTVARLG--GDEFVVVLPDVEGANDAAHVAG--KIIEDVARSL 962

Query: 351  RQRGGQEAHQAVAKGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRHINFYDRAIHQ 410
            R  G  E H + +   +G+S+   D + +  ++ +A  AM    A    +  F+  A+++
Sbjct: 963  RV-GAHELHTSAS---IGISLYPDDGETVPTVMQNADTAMYHAKAIGRNNFQFFASAMNR 1018

Query: 411  QIERRKTLEKWVQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPELLHASTQELIS 470
                R  LE+ +++ + N ++E+ +QP     +  V   EAL R++ PE         I 
Sbjct: 1019 AATERLELERKLRQAMVNDELELHFQPQFALAADRVTGVEALLRWRHPEDGLIPPDRFIP 1078

Query: 471  IAEDLGLINQLDELIGGKALKDLPKIHALFGHHVGVSINRSLNSDLSAEQILQSVVDMLA 530
            IAE+ GLI  + + +   A + L          + +++N S    L  ++    V  +L 
Sbjct: 1079 IAEETGLIVGIGDWVLQAACRQLKAWLDQGLPPLRMAVNLSTRQ-LKEKEFPSRVAAILQ 1137

Query: 531  ETPTLAKNITVELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSSFSYLTECQFD 590
            ET   A  + +E+TE+   +   +    LQ L + GVT+AIDDFGTG+SS SYL     D
Sbjct: 1138 ETGLPAVLLELEITESGVMERPEEAITTLQALNDMGVTLAIDDFGTGYSSLSYLKLFPID 1197

Query: 591  YLKIDREFVTNIEVGSRRYAIVKMVTDLAHTLGVKVVAEGVETEHEVYVLKSLGVDLLQG 650
             LKIDR FV +IE      AI +    LAH+LG++VVAEGVET  ++ +L + G D +QG
Sbjct: 1198 RLKIDRSFVRDIERDPDDAAIARGTIALAHSLGLEVVAEGVETSAQLDMLAADGCDEVQG 1257

Query: 651  FFFAKPLPLS 660
            +FF++PLPL+
Sbjct: 1258 YFFSRPLPLA 1267