Pairwise Alignments

Query, 818 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 953 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  189 bits (479), Expect = 8e-52
 Identities = 144/542 (26%), Positives = 254/542 (46%), Gaps = 18/542 (3%)

Query: 131 LFDNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHSQHFYVDMWQQ 190
           +FD  +   ++TD    I + NR F + TGY   E+LG    + +SG H + FY  MW+ 
Sbjct: 404 VFDTSNEAFLVTDADNNIRSVNRAFCETTGYSAEEVLGRNPRLLSSGHHDKTFYRQMWEA 463

Query: 191 LREQGGWSGTILSQRASGEVWPQDLSIKRLSPQKGQIF-YIGFTTDLAPHLDRVLDKQA- 248
           L  QG W G I  +R SGE++P+   I  +   +G++  ++   +D++    + L+++  
Sbjct: 464 LNSQGYWQGEIYDRRKSGEIYPKWTRINVVKDDQGRVVNHVAVFSDISDR--KALEERLQ 521

Query: 249 --GDVELLTQLPTLSKFSDQLKQRLPK-QQTTTGFVLAIQPKFSSDKYYAQIRRLAASLA 305
                + LT LP  +    +L+Q +    +   G +  +        ++  I       A
Sbjct: 522 FLAQHDHLTGLPNRNLLRLRLEQAVESAMERGAGGINPVALLLLDLDHFKTINDSLGHHA 581

Query: 306 QNRQVQ-----LCGYHGEGIFLCQLDAEKNL----EAQPLVGLQRTLRQFFIELRQRGGQ 356
            ++ ++     L     E   LC+   ++ L    +AQ L  + R        L      
Sbjct: 582 GDQLLRTVVKRLKNILRESSTLCRQGGDEFLIVLPQAQDLARVSRAAETVLAALATPFEV 641

Query: 357 EAHQAVAKGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRHINFYDRAIHQQIERRK 416
           + H     G +G+S+   D    + L+  A  A++           F+  A++     R 
Sbjct: 642 DGHPLSITGSIGISLAPDDGSDFDTLLKKADTALVHAKQSGRNAYRFFTEAMNVSTLERL 701

Query: 417 TLEKWVQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPELLHASTQELISIAEDLG 476
           TL++ + + +   ++ ++YQP +D  S  VV  EAL R++ PE L     + I +AE+ G
Sbjct: 702 TLQQRLHQALERQELVLYYQPQLDLASGRVVGVEALLRWRTPEGL-VPPGKFIPLAEETG 760

Query: 477 LINQLDELIGGKALKDLPKIHALFGHHVGVSINRSLNSDLSAEQILQSVVDMLAETPTLA 536
           LI  +   +  +A +            + +++N S       + +L +V D L+     A
Sbjct: 761 LIVPMGAWVIQEACRQARTWLDAGLPPMTMAVNLSA-LQFHRDNLLITVGDALSAASLPA 819

Query: 537 KNITVELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSSFSYLTECQFDYLKIDR 596
            ++ +ELTE+            L+ +   GV ++IDDFGTG+SS +YL     D LKID+
Sbjct: 820 ASLELELTESILIQDAEATLATLKAMNAMGVLLSIDDFGTGYSSLAYLKRFTVDKLKIDQ 879

Query: 597 EFVTNIEVGSRRYAIVKMVTDLAHTLGVKVVAEGVETEHEVYVLKSLGVDLLQGFFFAKP 656
            FV +I       AIV+ V  +A +L +K +AEGVETE +   L++ G D +QG+ +A+P
Sbjct: 880 SFVRDITSDGDSAAIVRAVVQMASSLKLKTIAEGVETESQAAALRATGCDEVQGYLYARP 939

Query: 657 LP 658
           +P
Sbjct: 940 MP 941