Pairwise Alignments

Query, 818 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1009 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  195 bits (495), Expect = 1e-53
 Identities = 147/557 (26%), Positives = 255/557 (45%), Gaps = 33/557 (5%)

Query: 122 MESAFAFDAL-FDNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHS 180
           +E +    AL +DN    + + D+   I+  N  F   TGY ++E+ G    +     + 
Sbjct: 451 IEESLKLSALVYDNSSEAMSVLDETGVIITVNAAFTAITGYSESEIRGQHIRLLYCDLNG 510

Query: 181 QHFYVDMWQQLREQGGWSGTILSQRASGEVWPQDLSIKRLSPQKGQIFY-IGFTTDLAP- 238
             FY +M  ++RE+G W G +  +R + E +   L+I  +  + GQ +  +   +D+   
Sbjct: 511 HGFYTEMNNEIREKGEWQGEMRQRRKNNEEYVIWLTINTIKDKDGQPYRRVALFSDITDK 570

Query: 239 -HLDRVLDKQAGDVELLTQLPTLSKFSDQLKQRLPKQQTTTGFVLAIQPKFSSDKYYAQI 297
              + ++ KQA + + LT LP      + L   +            +   F    Y+ ++
Sbjct: 571 KQSEHLIWKQA-NYDTLTGLPNRRMLLEYLGAEIKSADRNRNHFALM---FLDLDYFKEV 626

Query: 298 R-----------------RLAASLAQNRQVQLCGYHGEGIFLCQLDAEKNLEAQPLVGLQ 340
                             RL + +     V   G     + L  +   K +E      L+
Sbjct: 627 NDTLGHAMGDLLLIETASRLKSCVRDADVVARLGGDEFTVVLSSMVDHKGIERVAEHILR 686

Query: 341 RTLRQFFIELRQRGGQEAHQAVAKGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRH 400
           R    + +      G+E   A     +G+++   D   IE L+ HA QAM          
Sbjct: 687 RIAEPYVL------GEET--AYISASIGITLYPDDATSIEGLLKHADQAMYAAKDQGRNR 738

Query: 401 INFYDRAIHQQIERRKTLEKWVQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPEL 460
            N++  ++ +  + R  L + +++ + + + E+ YQPIV   +  V+K EAL R+  PE 
Sbjct: 739 FNYFTPSMQEYAKYRMRLIQDLRQAVVSKEFELHYQPIVTMTTGEVLKAEALLRWFHPER 798

Query: 461 LHASTQELISIAEDLGLINQLDELIGGKALKDLPKIHALFGHHVGVSINRSLNSDLSAEQ 520
            + S  E I +AED GLI ++   +  +A +        FG  + +S+N+S         
Sbjct: 799 GYVSPAEFIPVAEDTGLIVEIGNWVFEQAARQSALWRKTFGVDIQISVNKSPIQFRDEGT 858

Query: 521 ILQSVVDMLAETPTLAKNITVELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSS 580
           +L + +++L +       + VE+TE    D+     E L   R+ GV V++DDFGTG+SS
Sbjct: 859 LLHNWLELLQKLDVTGTGVCVEITEGLLLDASMGVTEKLLAYRDAGVQVSLDDFGTGYSS 918

Query: 581 FSYLTECQFDYLKIDREFVTNIEVGSRRYAIVKMVTDLAHTLGVKVVAEGVETEHEVYVL 640
            +YL +   DYLKID+ F  NI+       + + +  +AH LG+KV+AEGVETE +  VL
Sbjct: 919 LAYLKKFDIDYLKIDQSFTRNIDTDESDQTLCEAIIVMAHKLGMKVIAEGVETEAQRQVL 978

Query: 641 KSLGVDLLQGFFFAKPL 657
            + G D  QG+ F+KP+
Sbjct: 979 LTAGCDYGQGYLFSKPV 995