Pairwise Alignments

Query, 818 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1077 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  216 bits (550), Expect = 6e-60
 Identities = 150/568 (26%), Positives = 268/568 (47%), Gaps = 27/568 (4%)

Query: 130  ALFDNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHSQHFYVDMWQ 189
            A+F+    G+++TD    I   N  F Q TGY   E+ G   S+ +S +H  H+Y  MW+
Sbjct: 513  AVFNYSAEGIMVTDADNHIELINPAFSQITGYSLEEVKGRSPSILSSNRHPHHYYTAMWE 572

Query: 190  QLREQGGWSGTILSQRASGEVWPQDLSIKRLSPQKGQIF-YIGFTTDLAPHLDRVLDK-Q 247
             L ++G W G I ++R  G+V+P+ L+I  +  ++G+I  +IG   D++       D   
Sbjct: 573  ALHKEGKWEGEIWNKRKDGQVYPEYLAITVVRNEQGEIIQHIGLFMDISKRKQYEQDLWY 632

Query: 248  AGDVELLTQLPTLSKFSDQLKQRLPKQQTTTGFVLAIQPKFSSDKYYAQIRRLAAS--LA 305
              + + LT LP    F+++L+  +   Q  +  +  +       KY   ++  A    L 
Sbjct: 633  QANFDTLTGLPNRKLFNERLQHEIQLAQHDSRKLAILLIDLDQFKYINDVQGHATGDLLL 692

Query: 306  QNRQVQLCGYHGEGIFLCQLDAEKNLEAQPLV----GLQRTLRQFFIELRQRGGQEAHQA 361
            Q+   +L    G+  F+ ++  ++ +   P V     ++    +    L         + 
Sbjct: 693  QDVAKRLENIAGKNDFVARIGGDEFVLILPRVTNEFAIEHMASRIIETLATPFNLNEREI 752

Query: 362  VAKGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRHINFYDRAIHQQIERRKTLEKW 421
                  G+ V   D   +  L  +   AM +       +  ++   ++Q +  R  LE+ 
Sbjct: 753  QISASFGIGVYPEDGLDVSSLTRNTEMAMYQAKDAGRNNFKYFTSGMNQAMFARMELEQR 812

Query: 422  VQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPELLHASTQELISIAEDLGLINQL 481
            +++ +A  +  +FYQPIVD ++  +   EAL R+Q P+L      + I+IAE+ GLI  +
Sbjct: 813  LRRAVAQDEFTLFYQPIVDMKTGQICSVEALIRWQDPDLGLIPPDQFIAIAEETGLIEPM 872

Query: 482  DELIGGKALKDLPKIHALFGHHVGVSINRSLNSD---------LSAEQILQSVVDMLAET 532
             E +  +A+ DL +       H+G+++N ++N           +  +Q+LQ   +     
Sbjct: 873  GEWVLNQAMHDLRQ-----WQHMGLNLNVAINVSSRQCINTRGIGFDQVLQECFNRHHIN 927

Query: 533  PTLAKNITVELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSSFSYLTECQFDYL 592
            P   +N+ +E+TE+      S     L+ +R+ G  + IDDFGTG+SS SYL +     +
Sbjct: 928  P---RNVHIEITESMLMGDASHCLSTLESIRHLGSQIYIDDFGTGYSSLSYLKKFPISVI 984

Query: 593  KIDREFVTNIEVGSRRYAIVKMVTDLAHTLGVKVVAEGVETEHEVYVLKSLGVDLLQGFF 652
            KIDR FV +         +VK +  +  +L +++VAEG+ETE +   L+ LG    QG+ 
Sbjct: 985  KIDRSFVEHALENCSNANLVKAIVMMGQSLEMELVAEGIETEAQWQFLRDLGCHYAQGYL 1044

Query: 653  FAKPLPLSNL--IHASDYRKHLKLTNRE 678
             +KPLP   +  +      K L L  RE
Sbjct: 1045 LSKPLPFDEITPLLGQTLPKMLHLEQRE 1072