Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., Transcriptional activator MetR from Pseudomonas fluorescens FW300-N2E2

 Score =  307 bits (786), Expect = 2e-88
 Identities = 153/301 (50%), Positives = 210/301 (69%), Gaps = 1/301 (0%)

Query: 1   MIELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTA 60
           ++EL+HLKTL +LR+  SL   A  LHLTQSALSHQ K+LE R+G  LF+RKT+PVRFT+
Sbjct: 1   VLELRHLKTLHALREADSLVEAAERLHLTQSALSHQFKELEERLGMPLFVRKTKPVRFTS 60

Query: 61  EGEILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQVSWPN 120
            G  LL+LAD  LP +  AE ++A L     GRLHMAIECHSCFQWLMP + +++ +WP 
Sbjct: 61  AGLRLLQLADAALPLLRGAERDIARLAGGTAGRLHMAIECHSCFQWLMPTIDQFRDAWPE 120

Query: 121 VALDFSSGFGFEPLPALLAGELDLVITSDILPRSEVHYEPLFDFEMRLITATNHPLADKA 180
           V LD +SGF F PLPAL  G+LDLV+TSD L  + + Y PLF +E  L  A  H LA K 
Sbjct: 121 VELDLASGFAFAPLPALARGDLDLVVTSDPLELAGITYVPLFTYEAMLAVANQHRLAGKP 180

Query: 181 GIEPQDLADQTMLTYPVQKQRLDVVKHFLQPAGVEPARWKQADNTLMLVQMVSAGLGVAA 240
            I P+DL  +T++TYPV++ RLD+   FL+PA +EPA+ + ++ T+M++Q+V++G GV  
Sbjct: 181 YIVPEDLISETLITYPVERDRLDIFTRFLEPADIEPAQVRTSELTVMMMQLVASGRGVCG 240

Query: 241 LPNWAISEFSRQGLITSKPLG-KGLWRRLFAATRHSEKDKRYLQAFFATARQQCKSHLDG 299
           +P+WA+ E+S +G + +K LG KGL+  L+AA R    D  Y++ F  TA+    S LDG
Sbjct: 241 MPHWALHEYSSRGYVKAKRLGEKGLFATLYAAVRTDMLDAPYMRDFLLTAKDTSFSTLDG 300

Query: 300 I 300
           +
Sbjct: 301 V 301