Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., Transcriptional regulators, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 82/303 (27%), Positives = 144/303 (47%), Gaps = 19/303 (6%)

Query: 1   MIELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTA 60
           M+ L+ ++  I++ +TGS++A A +  ++QS L+  I+ LE  IG  LF R  + +  T 
Sbjct: 1   MMTLRQIRHFIAVAETGSISAAAQTAFISQSTLTLAIQQLEQEIGVSLFNRHAKGMTLTH 60

Query: 61  EGEILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQVSWPN 120
           +G   LR A  IL  +  A+  L    + V G++ + +       +L   L  +Q ++PN
Sbjct: 61  QGHQFLRQAHLILATVDNAKRSLQQSTDQVAGQVTIGVTSLVAGYYLADLLTRFQRAYPN 120

Query: 121 VALDFSSGFGFEPLPALLAGELDL--VITSDILPRSEVHYEPLFDFEMRLITATNHPLAD 178
           V +             L++GE+D+  +I S++  R  +  E L     RL     HPL +
Sbjct: 121 VEIRVMEDERPYIEHLLVSGEIDVGVLILSNLEDRHALQTEVLTHSPHRLWLPAQHPLLE 180

Query: 179 KAGIEPQDLADQTMLTYPVQKQRLDVVKHFLQPAGVEPARWKQADNTLMLVQMVSAGLGV 238
              I   D+A + ++   V +   +  +   + AG++P    +  +T  +  +V+AGLGV
Sbjct: 181 HDSINLADVAREPLIQLNVDEMDRNA-QRLWRGAGLQPKITLRTASTEAVRSLVAAGLGV 239

Query: 239 AALPNWAISEFSRQG-LITSKP-------LGKGL-WRRLFAATRHSEKDKRYLQAFFATA 289
           +  P+     +S +G +I ++P       L  GL WRR     R +  D      F A A
Sbjct: 240 SIQPDMTYRPWSLEGDIIEARPIADLNQTLDVGLAWRR--GTARPASVD-----PFLAVA 292

Query: 290 RQQ 292
           R+Q
Sbjct: 293 REQ 295