Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase from Pseudomonas fluorescens FW300-N2E2

 Score = 97.4 bits (241), Expect = 4e-25
 Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 6/292 (2%)

Query: 4   LKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTAEGE 63
           LK ++  +++  + S       LHL+QSALS  IK LE  +GG+LF R TR V  T EGE
Sbjct: 3   LKQIRAFLAVAQSLSFAVACERLHLSQSALSLTIKALEEGLGGRLFSRNTRNVALTPEGE 62

Query: 64  ILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQVSWPNVAL 123
            LL LA  ++     AE+E+        GR+ +A         L P L+ ++  +PNV +
Sbjct: 63  SLLPLARRLVADWDNAEDEMRQRFTLQRGRVTLAAMPSFAGNLLPPILKTFRARFPNVNV 122

Query: 124 DFSSGFGFEPLPALLAGELDLVITSDILPRSEVHYEPLFDFEMRLITATNHPLADKAGIE 183
             +     + L  +    ++L +  + +  + + + PL+      +   + PLA +  I 
Sbjct: 123 TVNDVINEQVLEMVRDRHVELGVAFEPMQGASLAFTPLYLDRFVAVVPLDSPLAQRDEIH 182

Query: 184 PQDLADQTMLTYPVQKQRLDVVKHFLQPAGVEPARWKQADNTLMLVQMVSAGLGVAALPN 243
            + L +Q  +T         +++  LQ  G++     ++     + +MV++GLGV+A+P 
Sbjct: 183 WETLLEQPFITLQRPSTVRVMLEEHLQARGMKLPVEFESHQLATVGRMVASGLGVSAVPA 242

Query: 244 WAISEFSRQG---LITSKPLGKGLWRRLFAATRHSEKDKRYLQAFFATARQQ 292
             + +    G   +  S P+   + R +   T+   +     QA F T R Q
Sbjct: 243 LCVGQMHELGARCITLSDPV---IERAIGVLTKPGHELSAAAQALFDTLRDQ 291