Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., transcriptional activator protein MetR (RefSeq) from Shewanella amazonensis SB2B

 Score =  254 bits (649), Expect = 2e-72
 Identities = 137/287 (47%), Positives = 194/287 (67%), Gaps = 4/287 (1%)

Query: 1   MIELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTA 60
           MIEL+HL+TL++L+++GSL A A    +TQSALSHQIK+LE RI   +F+RK++P+ FT 
Sbjct: 1   MIELRHLRTLMALKESGSLAAAAKKRFVTQSALSHQIKELETRINSPVFVRKSKPLSFTQ 60

Query: 61  EGEILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQVSWPN 120
           EG  LL LA++ILP++   E  L    E     L + IECHSCF+WLMP +  ++  +P+
Sbjct: 61  EGARLLNLAEEILPRVMETEFVLKKGLETDAHLLKVGIECHSCFRWLMPVIETFRAEYPD 120

Query: 121 VALDFSSGFGFEPLPALLAGELDLVITSDILPRSEVHYEPLFDFEMRLITATNHPLADKA 180
             LD SS   F+ L AL +GELD+V+TSD +P  ++ Y+ LFDFE+RL+ A  HPLA K+
Sbjct: 121 ADLDLSSRHLFDSLNALESGELDIVLTSDPVPGHQLAYQHLFDFEVRLVVAKEHPLASKS 180

Query: 181 GIEPQDLADQTMLTYPVQKQRLDVVKHFLQPAGVEPARWKQADNTLMLVQMVSAGLGVAA 240
            + P+DLA   +++YPV  +RLD+ + FL+PAG+EP   K  D T +L Q ++   G+AA
Sbjct: 181 LVLPKDLAGLPIISYPVPLERLDLFRLFLEPAGIEPGVQKSCDLTSVLFQRIACQDGIAA 240

Query: 241 LPNWAISEFSRQGL-ITSKPLG-KGLWRRLFAATRHSEKDKRYLQAF 285
           LP+W+ISE   QGL +TS  LG +G+ R LF A R    + R LQ +
Sbjct: 241 LPSWSISE--AQGLSLTSLRLGAEGVKRPLFGAYRRGSANSRQLQRY 285