Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score = 96.3 bits (238), Expect = 8e-25
 Identities = 71/244 (29%), Positives = 115/244 (47%), Gaps = 6/244 (2%)

Query: 2   IELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTAE 61
           I +K+L   ++L +TGS T  A  LHLTQ  LS  ++ LE     QL +R  + +  T  
Sbjct: 3   IPIKNLHCFVTLAETGSFTRAAEKLHLTQPTLSKMLQRLEDHWQQQLIIRNNQKLSLTQA 62

Query: 62  GEILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQVSWPNV 121
           GE+LL  A ++L +    E +L++L+    G L + + C      ++  L  ++  +P V
Sbjct: 63  GELLLEHAREMLGQWHLLEEDLSNLRGVQRGYLRLGV-CPMMSSLVIELLTAFRARYPGV 121

Query: 122 ALDFSSGFGFEPLPALLAGELDLVITSDILPRS---EVHYEPLFDFEMRLITATNHPLAD 178
            L+     GF    ALLA  LD+  T+  LP +   E+  +PL  + +       H LA+
Sbjct: 122 RLEMFEYGGFGCEKALLANNLDIAFTA--LPATHADELTAQPLTAYPLLACLPAGHKLAN 179

Query: 179 KAGIEPQDLADQTMLTYPVQKQRLDVVKHFLQPAGVEPARWKQADNTLMLVQMVSAGLGV 238
           KA ++  D      + Y        ++    + AGVE     ++     L  MV A +G+
Sbjct: 180 KAALDWCDFGSHPFIMYNQDFALAKLLDSLARNAGVELNVAYRSGQWDFLASMVEANMGL 239

Query: 239 AALP 242
           A LP
Sbjct: 240 AILP 243