Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., transcriptional regulator, LysR family from Phaeobacter inhibens DSM 17395

 Score =  245 bits (626), Expect = 8e-70
 Identities = 119/294 (40%), Positives = 188/294 (63%), Gaps = 1/294 (0%)

Query: 2   IELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTAE 61
           IE +HL+T+ ++   G L   A  L++TQSALSHQIK LE + G +LFLR+++P++ +A 
Sbjct: 3   IEFRHLRTIKAIHQEGGLARAADQLNITQSALSHQIKGLEDQAGVELFLRRSKPMKLSAA 62

Query: 62  GEILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQVSWPNV 121
           G  LLRLAD +LP++   + E ++L++   GR+++AIECH+CF+WL P L   + +W +V
Sbjct: 63  GLRLLRLADQVLPQVEAMQAEFSALRDGNTGRMYIAIECHACFEWLFPVLEGLRKNWADV 122

Query: 122 ALDFSSGFGFEPLPALLAGELDLVITSDILPRSEVHYEPLFDFEMRLITATNHPLADKAG 181
            +D   G  F+ LPAL   E+DLVI+SD      + +  LFD++   + +  HPLA+K  
Sbjct: 123 DVDIRPGLAFDALPALQKEEVDLVISSDPEVLPGIEFIELFDYKPVFVASALHPLAEKPH 182

Query: 182 IEPQDLADQTMLTYPVQKQRLDVVKHFLQPAGVEPARWKQADNTLMLVQMVSAGLGVAAL 241
           IE +D   QT++TYPV K RLD+    L PAGVEPA  +Q + T +++ +V++  G++ L
Sbjct: 183 IEAEDFRGQTLITYPVDKARLDIFSQLLTPAGVEPAHIRQVELTAVILLLVASNRGISVL 242

Query: 242 PNWAISEFSRQGLITSKPL-GKGLWRRLFAATRHSEKDKRYLQAFFATARQQCK 294
           P+W + E        ++PL  KG+ RRL+AA R  +++K Y+Q     A+ + +
Sbjct: 243 PDWVVREVKYSSDYVTRPLTSKGITRRLYAAIRSEDREKPYMQELIRLAKVEAR 296