Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  251 bits (641), Expect = 1e-71
 Identities = 130/283 (45%), Positives = 186/283 (65%)

Query: 1   MIELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTA 60
           MIEL+HL+TL++L+++GSL   A    +TQSALSHQIK+LE RI   +F+RK++P+ FT 
Sbjct: 1   MIELRHLRTLVALKESGSLAGAAKKRFVTQSALSHQIKELETRINSAIFVRKSKPLSFTQ 60

Query: 61  EGEILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQVSWPN 120
           EG  LL LA++ILPK+   E +L +        L + IECHSCF+WLMP + ++  S+P+
Sbjct: 61  EGARLLNLAEEILPKVIETEIDLKNGLGSEARDLFVGIECHSCFRWLMPVIEQFNASFPH 120

Query: 121 VALDFSSGFGFEPLPALLAGELDLVITSDILPRSEVHYEPLFDFEMRLITATNHPLADKA 180
             L+ SS   F+ L AL  G+LD+V+TSD +P  ++ Y+ LFDFE++L+ A +HPLA+  
Sbjct: 121 TNLELSSRHLFDSLTALKQGQLDVVLTSDPIPDHDIAYQHLFDFEVKLLVAADHPLAELP 180

Query: 181 GIEPQDLADQTMLTYPVQKQRLDVVKHFLQPAGVEPARWKQADNTLMLVQMVSAGLGVAA 240
            +    L DQT+LTYPV   RLD+ +HF++PAGV  A+  + D T ML+Q ++   GVAA
Sbjct: 181 YVTAAQLKDQTLLTYPVPLDRLDIYRHFMEPAGVPVAKQIRCDLTAMLLQRIACKDGVAA 240

Query: 241 LPNWAISEFSRQGLITSKPLGKGLWRRLFAATRHSEKDKRYLQ 283
           LP+W+I+E     L   K   +GL R LF A R +    R  Q
Sbjct: 241 LPSWSINEAHGLSLKAVKLGSEGLRRPLFGAYRSNGSSARLAQ 283