Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., transcriptional activator protein MetR (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  253 bits (647), Expect = 3e-72
 Identities = 129/283 (45%), Positives = 186/283 (65%)

Query: 1   MIELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTA 60
           MIEL+HL+TL++L+++GSL   A    +TQSALSHQIK+LE RI   +F+RK++P+ FT 
Sbjct: 1   MIELRHLRTLMALKESGSLAGAAKKRFVTQSALSHQIKELEQRINSPIFVRKSKPLSFTQ 60

Query: 61  EGEILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQVSWPN 120
           EG  LL LA++ILPK+   E +L +  E    +L + IECHSCF+WLMP + +++   P 
Sbjct: 61  EGARLLHLAEEILPKVLETETDLKNGLETDTNQLRVGIECHSCFRWLMPVMEQFRQDHPQ 120

Query: 121 VALDFSSGFGFEPLPALLAGELDLVITSDILPRSEVHYEPLFDFEMRLITATNHPLADKA 180
             LD SS   F+ L AL  GELD+V+TSD +P   + Y+ LFDFE++L+ A +HPLA +A
Sbjct: 121 AELDLSSRHLFDSLNALEMGELDIVLTSDPVPGHSLAYQHLFDFEVKLVVAKDHPLAKEA 180

Query: 181 GIEPQDLADQTMLTYPVQKQRLDVVKHFLQPAGVEPARWKQADNTLMLVQMVSAGLGVAA 240
            + P+ L+   +++YPV   RLD+ +HFL+PAG+E    K  D T+ML+Q ++   G+AA
Sbjct: 181 YVTPKQLSRLPIISYPVPLARLDIYRHFLEPAGIEAGEQKTCDLTMMLLQRIACKDGIAA 240

Query: 241 LPNWAISEFSRQGLITSKPLGKGLWRRLFAATRHSEKDKRYLQ 283
           LPNW+I+E     L   K   +GL R LF A R    +   +Q
Sbjct: 241 LPNWSINEGHGLSLAAVKLGQEGLKRPLFGAYRRHSANSALVQ 283