Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., transcriptional regulator, LysR family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  239 bits (610), Expect = 6e-68
 Identities = 117/292 (40%), Positives = 185/292 (63%), Gaps = 1/292 (0%)

Query: 2   IELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTAE 61
           +E +HL+T+ ++ + G L   A  L++TQSALSHQIK LE + G +LF+R+++P++ +A 
Sbjct: 11  LEFRHLRTVKAIHEAGGLAKAADQLNITQSALSHQIKGLEDQAGLELFVRRSKPLKLSAA 70

Query: 62  GEILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQVSWPNV 121
           G  LLRLA+ +LP+++  E E   +K    GRLH+AIECH+C++WL P L +++ +WP+V
Sbjct: 71  GMRLLRLAEQVLPQVAALEEEFRGIKAGKTGRLHIAIECHACYEWLFPVLEQFRKAWPDV 130

Query: 122 ALDFSSGFGFEPLPALLAGELDLVITSDILPRSEVHYEPLFDFEMRLITATNHPLADKAG 181
            +D   G  F+ LPAL   E+DLVI+SD      V + PLFD+E   + +  HPLA K  
Sbjct: 131 DVDIRPGLQFQALPALQREEVDLVISSDPEELPGVDFTPLFDYEPVFVASAAHPLAAKPF 190

Query: 182 IEPQDLADQTMLTYPVQKQRLDVVKHFLQPAGVEPARWKQADNTLMLVQMVSAGLGVAAL 241
           +E +D  D+ ++TYPV + RLDV    L PA +EP   +Q + T +++ +V++  GVA L
Sbjct: 191 VEAEDFRDELLITYPVDRARLDVFSELLIPARIEPRAVRQVELTAVILLLVASNRGVAVL 250

Query: 242 PNWAISEFSRQGLITSKPLGK-GLWRRLFAATRHSEKDKRYLQAFFATARQQ 292
           P+W + E        ++PL + G+ +RL+AATR +E    ++      AR +
Sbjct: 251 PDWVVREVRYNSDYVTRPLTESGVTKRLYAATRDTETTLPFMSHVIRLARTE 302