Pairwise Alignments

Query, 280 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., Putative transport from Pseudomonas fluorescens FW300-N2E2

 Score = 69.3 bits (168), Expect = 9e-17
 Identities = 60/270 (22%), Positives = 113/270 (41%), Gaps = 32/270 (11%)

Query: 2   EHNQFDSLLPPQMA---ERAAITGEGKAKKAAYKSFLLAISAGIQIGIAFVFYTVVTTGA 58
           E ++ D   PP+ A   E     G  + +++    +  A++AG+ +G++ +   ++ +  
Sbjct: 16  EQHEVDRNQPPRAAVLHEIIRTQGNQELERSIAALWWSALAAGLTMGLSLMAMGLLNSRL 75

Query: 59  HDMPYGVTKLLGGLAFSLGLILVVITGGELFTSSVLILVAKASGKIS---WKELVRNWTV 115
            D  +   K++    +  G + V++   +LFT + L  V     K +   +  L+R W V
Sbjct: 76  PD--HEGFKVIASFGYCAGFLAVILARQQLFTENTLTAVLPIMSKPTLGNFGRLLRLWGV 133

Query: 116 VYFGNLCGSIILVFIMLATRQFMEDGGQLGLNAMAISQHKLHHTFLQAFALGLMCNILVC 175
           V  GNLCG++++ ++ML    F     Q  L    I +  + +   Q FA G++   ++ 
Sbjct: 134 VLVGNLCGTLLVAYVMLHLPIFDPRTDQAFLE---IGRKVMENDTGQMFAKGIISGWMIA 190

Query: 176 LAVWMTFSARSLTDKVMVLILPVAMFVSSGFEHCIANMFQVPMAIGIKYFAPESFWAMTG 235
             VWM  S  S   K+ ++ L   +     F H +    +V   +     + E FW +  
Sbjct: 191 TMVWMIPSMESA--KMWIITLITYLMALGDFTHIVVGSAEVSYLVFAGQLSWEDFWMVFA 248

Query: 236 ANIAQYADLNFVNFIVNNLIPVTLGNIVGG 265
                               P   GNI+GG
Sbjct: 249 G-------------------PTLAGNIIGG 259