Pairwise Alignments

Query, 280 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., Formate/nitrite transporter (NCBI) from Rhodospirillum rubrum S1H

 Score =  195 bits (496), Expect = 9e-55
 Identities = 106/271 (39%), Positives = 157/271 (57%), Gaps = 9/271 (3%)

Query: 11  PPQMAERAAITGEGKAKKAAYKSFLLAISAGIQIGIAFVFYTVVTTGAHDMP-YGVTKLL 69
           P ++AE A  T   KA   A K   L   AG   G   +     T  AHD    G+ +L+
Sbjct: 6   PKEIAENAVKTYGLKAAMPASKILALGFLAG---GFIALGAEAATLAAHDASGVGIGRLI 62

Query: 70  GGLAFSLGLILVVITGGELFTSSVLILVAKASGKISWKELVRNWTVVYFGNLCGSIILVF 129
            GL FS GL++V+I G ELFT +VLI +     K+    ++RNWT+V+  N  G++++  
Sbjct: 63  SGLVFSTGLMMVMIAGAELFTGNVLIWMDFLERKVGVNAMLRNWTLVWLSNFAGAVVVAS 122

Query: 130 IMLATRQFMEDGGQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTFSARSLTD 189
           +M  +  +  +   +G   +  +  KL  T+ +AF  G+ CN +VCL VWM +SA+    
Sbjct: 123 MMDLSGLWNTNEAHVGAYVLKTAVGKLSLTYTEAFVRGIFCNWMVCLGVWMAYSAKDTAG 182

Query: 190 KVMVLILPVAMFVSSGFEHCIANMFQVPMAIGIKYFAPESFWAMTGANIAQYAD-LNFVN 248
           KV+ ++ P+ +FV S FEHC+ANM+ +P AI    FA  +  A+  +++    D L + N
Sbjct: 183 KVLAILFPITLFVLSNFEHCVANMYYIPAAI----FAKANIAAVEASHLGDKLDLLTWSN 238

Query: 249 FIVNNLIPVTLGNIVGGGVFVGMWYWLIYLK 279
           FIVNNL+PVTLGNIVGG +FVG +YW  YL+
Sbjct: 239 FIVNNLVPVTLGNIVGGALFVGSFYWFTYLR 269