Pairwise Alignments

Query, 280 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., inner membrane protein YfdC from Phaeobacter inhibens DSM 17395

 Score = 57.4 bits (137), Expect = 3e-13
 Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 30/269 (11%)

Query: 9   LLPPQMAERAAITGEGKAKKAAYKSFLLAISAGIQIGIAFVFYTVVTTGAHDMPYGVTKL 68
           L P  + E     GE + ++     +   I+AG+ I  + +   V  T   D  +  + L
Sbjct: 27  LSPRLIFETIRRNGEEELERPVRALWWSGIAAGLLISFSVLGKAVFKTHLPDASW--SPL 84

Query: 69  LGGLAFSLGLILVVITGGELFTSSVLILVAKAS---GKISWKELVRNWTVVYFGNLCGSI 125
           +  L +SLG ++V++   +LFT + +  V        K S+    R W VV   N+ G+ 
Sbjct: 85  VENLGYSLGFLMVILGRMQLFTENTITTVVPVMLRWDKASFLRTARLWGVVLAANVVGAF 144

Query: 126 ILVFIMLATRQFMEDGGQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTFSAR 185
           ++      T     D   L    + IS+H      L     G+   IL+   VWM  S +
Sbjct: 145 LIASFFALTPVLDAD---LRAAMVKISEHATGMPPLIGLISGIPSGILIAAIVWMLPSTQ 201

Query: 186 SLTDKVMVLILPVAMFVSSGFEHCIANMFQVPMAIGIKYFAPESFWAMTGANIAQYADLN 245
               ++ ++I+   +  +  F H +A   ++            +F  + G        L 
Sbjct: 202 H--SEIPLIIIFTWLIAAGDFTHIVAGSVEM------------AFLMVQGL-------LP 240

Query: 246 FVNFIVNNLIPVTLGNIVGG-GVFVGMWY 273
               I    IPV +GN++GG  VF  + Y
Sbjct: 241 LWQAIFGFFIPVLIGNVIGGTAVFTVLTY 269