Pairwise Alignments

Query, 280 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 508 a.a., formate/nitrite transporter (RefSeq) from Shewanella loihica PV-4

 Score =  283 bits (724), Expect = 5e-81
 Identities = 141/265 (53%), Positives = 192/265 (72%), Gaps = 1/265 (0%)

Query: 12  PQMAERAAITGEGKAKKAAYKSFLLAISAGIQIGIAFVFYTVVTTGAHDMPYGVTKLLGG 71
           P + +R A  G+ K  K A +S   A+ AG  I +AFVFY  VTTGA    +G+ +L+GG
Sbjct: 22  PSLCQRVATYGQEKVTKQAMQSIGQAMFAGAFIALAFVFYLTVTTGASG-DWGMVRLVGG 80

Query: 72  LAFSLGLILVVITGGELFTSSVLILVAKASGKISWKELVRNWTVVYFGNLCGSIILVFIM 131
           LAFSLGL+LVVI GGELFTSSVL  VA A  ++S +EL+  W  VY GN CG++I++ ++
Sbjct: 81  LAFSLGLMLVVICGGELFTSSVLSSVAWAQKRVSTRELLACWGRVYLGNFCGAMIMLALI 140

Query: 132 LATRQFMEDGGQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTFSARSLTDKV 191
           L+ + ++ DGG  GLNA+ ++QHKLHH++ QAFALG++CN+LVCL VWMTF+++    K 
Sbjct: 141 LSAKMYLLDGGLWGLNALKVAQHKLHHSWGQAFALGILCNMLVCLGVWMTFASKEALTKA 200

Query: 192 MVLILPVAMFVSSGFEHCIANMFQVPMAIGIKYFAPESFWAMTGANIAQYADLNFVNFIV 251
           ++L+LPVAMFVSSGFEH IAN+F VP+ I IK  A   ++ + G    Q++DL  ++F+ 
Sbjct: 201 ILLMLPVAMFVSSGFEHSIANLFMVPLGIAIKQLAIWDWYQIPGFTAEQFSDLTLLHFLT 260

Query: 252 NNLIPVTLGNIVGGGVFVGMWYWLI 276
           NNLIPVT GNIVGGG+ VG+ YW I
Sbjct: 261 NNLIPVTAGNIVGGGLVVGLGYWWI 285