Pairwise Alignments

Query, 280 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., formate/nitrite transporter family protein from Methanococcus maripaludis S2

 Score =  127 bits (320), Expect = 2e-34
 Identities = 91/285 (31%), Positives = 138/285 (48%), Gaps = 34/285 (11%)

Query: 11  PPQMAERAAITGEGKAKKAAYKSFLLAISAGIQIGIAFVFYTVVTTG-AHDMPYGVTKLL 69
           P +M E A   G+ K   +  +  +  +  G  I +     TVV TG    M  G+ K +
Sbjct: 6   PDKMVELAGNAGQVKGNLSPSQLLVRGVMGGAYIAMGGGLATVVGTGIGAAMGAGLGKFM 65

Query: 70  GGLAFSLGLILVVITGGELFTSSVLIL-VAKASGKISWKELVRNWTVVYFGNLCGSIILV 128
               F +GLIL+++TG EL T  +++L VA    K S+ +L++ W  VY GNL GS+I  
Sbjct: 66  AAAVFPVGLILIILTGMELVTGDMMLLPVAVFQRKASYAQLIKVWIYVYIGNLIGSLIYA 125

Query: 129 FIML--ATRQFMEDGGQLGLNAMAISQHKLHHT------------FLQAFALGLMCNILV 174
            +M     R F    G+  +NA   S                   +L A   G+ CN LV
Sbjct: 126 SMMAFGPLRSFDSATGEAAVNAFGQSAINTAQAKVLPYMAAGSMGWLAALVKGIGCNWLV 185

Query: 175 CLAVWMTFSARSLTDKVMVLILPVAMFVSSGFEHCIANMFQVPMAIGIKYFAPESFWAMT 234
            LAV  + ++ S+  K  ++  P+  FV++GFEHC+ANM+ +P  +            M 
Sbjct: 186 NLAVIGSMASTSILGKFFMIWFPIMAFVATGFEHCVANMYFIPTGM------------ML 233

Query: 235 GANIAQYADLNFVNFIVNNLIPVTLGNIVGGGVFVGMWYWLIYLK 279
           GA +      +  ++ + N+IPVT+GNI+G  VFV M Y   Y K
Sbjct: 234 GATV------SVADWWLWNIIPVTIGNIIGAVVFVAMIYQFAYGK 272