Pairwise Alignments

Query, 280 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., formate transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  296 bits (757), Expect = 5e-85
 Identities = 148/260 (56%), Positives = 191/260 (73%)

Query: 17  RAAITGEGKAKKAAYKSFLLAISAGIQIGIAFVFYTVVTTGAHDMPYGVTKLLGGLAFSL 76
           +A I G+ K  KA ++SF LA+ AG  I +AFVFY  VTTGA D  +G+ +L+GG+AFSL
Sbjct: 30  QAEIYGKSKVVKAPWQSFGLAVFAGAFIALAFVFYLTVTTGAGDSAWGLVRLVGGIAFSL 89

Query: 77  GLILVVITGGELFTSSVLILVAKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQ 136
           GLILVVI GGELFTSSVL  VA A  +++  EL++ WT VY GN  G++++V +++A   
Sbjct: 90  GLILVVICGGELFTSSVLSSVAWAQKQVTTSELLKCWTRVYLGNFVGAMLMVGLIMAAGL 149

Query: 137 FMEDGGQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTFSARSLTDKVMVLIL 196
           +  DGG  GLNA+ ++QHKLHHT++QAF+LG++CN+LVCL +WMTF++R    K ++LIL
Sbjct: 150 YELDGGNWGLNALKVAQHKLHHTWIQAFSLGILCNMLVCLGIWMTFASRESLTKAILLIL 209

Query: 197 PVAMFVSSGFEHCIANMFQVPMAIGIKYFAPESFWAMTGANIAQYADLNFVNFIVNNLIP 256
           PVAMFVSSGFEH IAN+F VP  I I+  A   F+A  G    Q+ADL   NFI  NLIP
Sbjct: 210 PVAMFVSSGFEHSIANLFMVPFGITIQAVASPEFFASLGVTQEQFADLTVANFIFKNLIP 269

Query: 257 VTLGNIVGGGVFVGMWYWLI 276
           VTLGNIVGGGV VG+ YW I
Sbjct: 270 VTLGNIVGGGVIVGLGYWWI 289