Pairwise Alignments

Query, 394 a.a., pentaheme c-type cytochrome TorC from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., tetraheme cytochrome c (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  467 bits (1202), Expect = e-136
 Identities = 216/391 (55%), Positives = 285/391 (72%), Gaps = 3/391 (0%)

Query: 5   ILKMWHTMTRPAVHISLGVLTLGGFIAGVIFWGGFNTALEATNTEEFCISCHTMRDNVYQ 64
           ++ +W T+ +P   ++LG +++  FI G+IFWGGFNTALEATNTE FCISCH+M    YQ
Sbjct: 4   LINLWRTLNKPTKALTLGAVSISAFIMGIIFWGGFNTALEATNTEAFCISCHSMESKPYQ 63

Query: 65  ELQTTVHWKNHSGVRATCPDCHVPHEWTAKIARKMQASKEVFAQIFGDLDTPEKFEERRI 124
           ELQ TVHW NHSGVRATCPDCHVPH W+ KIARKM+AS +V+  +F  ++TPEKFE +R+
Sbjct: 64  ELQETVHWSNHSGVRATCPDCHVPHNWSRKIARKMEASHDVWGWLFNTVNTPEKFEAKRL 123

Query: 125 ELAKHEWDRFAANKSLECKNCHNYESMDFDQMSATARIQMKQAAERDQSCIDCHKGIAHN 184
           E+A  EW RF  + SL CKNCHNY SM ++ MS  A+ QMK+AAE DQSCIDCHKGIAH+
Sbjct: 124 EMASREWKRFDRDNSLACKNCHNYNSMKWESMSPLAQKQMKRAAEIDQSCIDCHKGIAHH 183

Query: 185 LPK-NMESSSGLIGELEGMASNTKYSNGETLVSVRFLPVYEDDQAKVEAGLLNPASEVKV 243
           LP+     +  LI E+    S+ +    +T  S    P++  ++  VEAG LN A++VKV
Sbjct: 184 LPEMGTARAPELIAEVGAGVSSLE--TNQTYYSALTKPLFFSEKGDVEAGTLNVATKVKV 241

Query: 244 LTEKGDMMQVEINGWRKSKGFGRVIQEDFGMNIAVASLLKEAAMSDAIVTTGEQKVDDMT 303
           L  KG  +++ I+GWRK  G GRVI  DFG+NI  A L K+AA ++ ++ T E+K D MT
Sbjct: 242 LETKGKRIKIGIDGWRKKIGAGRVIYMDFGVNILSAQLSKDAAETEGVIQTFEEKEDPMT 301

Query: 304 GLPWEQVSAKVWMKKEAMLNDINPVWEKAREAYKTNCSVCHTQPDEAHFDANTWPGMFDG 363
           GL W++V A++W  K+ +L ++ P+W  AR+ ++++CSVCHTQPDEAHFDANTWPGMF G
Sbjct: 302 GLKWQRVEAQIWTDKDYLLTELQPLWGYARDTFRSSCSVCHTQPDEAHFDANTWPGMFQG 361

Query: 364 MLAFVNFDTDSEALVLKYLQKHSSDFAEGHH 394
           MLAFVN D D++ALV KYLQ+HSS F +  H
Sbjct: 362 MLAFVNMDQDTQALVQKYLQEHSSTFVKKEH 392