Pairwise Alignments

Query, 820 a.a., trimethylamine-N-oxide reductase TorA from Vibrio cholerae E7946 ATCC 55056

Subject, 836 a.a., anaerobic dimethyl sulfoxide reductase, A subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  209 bits (532), Expect = 5e-58
 Identities = 201/762 (26%), Positives = 323/762 (42%), Gaps = 112/762 (14%)

Query: 83  YSPSRVRYPMVRLDWLKKHKYSAETRGNNRFIRVTWDEAIDLFYRELERVQKQYGPWAL- 141
           Y+P R+R PM R+            RG  +F+ ++WDEA      E++R+   YG  ++ 
Sbjct: 99  YAPDRLRTPMKRVG----------KRGEAKFVPISWDEAASTIASEIQRIASSYGNKSIL 148

Query: 142 -HAGQTGWNQTGAFHN--CTAMMQRAVGMHGNYITKVGDYSTGAGQTIMPYVLGSTEVYA 198
            H G      TGA++    +A   R + ++G ++   G+YS  A Q       G      
Sbjct: 149 KHYG------TGAYYGFASSACFDRVLNLNGGFLKIYGNYSW-AQQNEAAAATGFAST-- 199

Query: 199 QGTSWSEILDNSDNIILWANDPVKNLQVGWNCETHQSFGYLDQLKEKVAKGEINVVSVDP 258
            G+S + + D SD  +    +P +  Q G         GY D LK   A   + V+ VDP
Sbjct: 200 SGSSLTALYD-SDLFLGIGYNPSEMRQSG------SGEGY-DFLKALEANANLEVIMVDP 251

Query: 259 VKNKTQRFLQNDHLYINPQTDVAFMLALAHVLYTENLYD---KKFIETYCLGFE------ 309
               +    ++  L I P TD AF  A+A+ + +    D   K F++ YC+GF+      
Sbjct: 252 RYTDSMAGKESQWLPIRPGTDAAFAEAIAYEMISSGWVDTHSKAFLDKYCVGFDKASLEK 311

Query: 310 --------------EFIPYV------------LGKSKDKVEKTPEWAATICGVKPDAIRD 343
                         +++PY+             GK  D   +TP WAA ICG+    I+ 
Sbjct: 312 LVAEFTASGDPKKTQYLPYIDVEDNYRNYILGEGKFADNGPRTPAWAAKICGISEANIKS 371

Query: 344 FARMLVNGRTQLLF-GWCIQRQEHGEQPYWMGAVLAAMIGQIGLPGGGISYGHHYSGIGV 402
            A  ++N +   +  G  + R  +GEQ      +L+ + G++G PG  +S G       +
Sbjct: 372 VASKIMNAKAPFIVTGAGVNRHANGEQAMRACYMLSFLTGKVGQPG--VSNG------AL 423

Query: 403 PSTGFAGPGGFPRNLDQGAKPKWDNNDFNGYSRTIPVARWIDAILEPGKKINHNGNTVTL 462
           P  G     G    +  G+ P  ++  F  ++  I     + A  +    I    +  T 
Sbjct: 424 PYQGSLNRAG----MSGGSNPVKESISFFTWAEAIERGHEMTARKDG---IRGTADLDTP 476

Query: 463 PGFKMMVISGCNP---WHHHQDRNKMKRAFQ---KLETVVTIDFSWTATCRFSDIVLPAC 516
            G  +  +   N     + H D N   +  +   K E +V  D   TA+ R++DI+LP  
Sbjct: 477 LGADIKAVFAINSNALINQHSDCNGTAKILEDDTKCELIVVCDCWMTASARYADILLPDT 536

Query: 517 TQWERNDI--DSYGSYSGKGLIAMHRLVDPLFQSRTDFEIMTELTRRFGREKEYTRGMDE 574
           T  E ND+  DSY S     L+AM   V P+++S + FE+   +  + G+E EYT G DE
Sbjct: 537 TWLESNDLVNDSYASGIMGYLVAMKAAVKPMWESISMFEMGRLIAAKMGKEAEYTEGKDE 596

Query: 575 MEWVRSLYDECKKANEGKFAMPEFEEFWEKGFLDFGTGTPWVRHADFRKDPEIN---ALG 631
             W+  LY + +  +    A P F   + +     G    + +      D  IN   A+ 
Sbjct: 597 AAWLEELYQKTRTNSANTDAQPAFPNSYAEA-QKIGVFRAFSKTPVLALDSYINGGKAVS 655

Query: 632 TPSGFIEITSRKIGRYGY----------EHCQEHPMWFEKTERSHGGPGSDKHPFWLQSC 681
           TPSG +EI S  + + G           ++    PM+    E        D +P  L   
Sbjct: 656 TPSGKVEIYSLSMAQKGKDWIFNPNVKGDYITAIPMYQPTWEGYDDEDTKDDYPLQLMGY 715

Query: 682 HPDKRLHSQMCEAEAFRATYAVQGREPVYINPLDAKAKGIKDGDLVRVFNDRGQLLAGAV 741
           H   R HS        R        + V++NP DA  +G++ GD V+++NDRG +     
Sbjct: 716 HTKGRTHSSYHNVPWLREA----AEDAVWMNPADALGRGLRGGDKVQMWNDRGTVELPVR 771

Query: 742 LSDSYPRGVIRIEEGAWYGPLTEKVG----AICTYGDPNTLT 779
           ++     GV+ + +GAWY P   ++G     I   G  NTLT
Sbjct: 772 ITPRVAPGVVALGQGAWYQPDIARIGRSGHPIDVGGCINTLT 813