Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  196 bits (497), Expect = 7e-55
 Identities = 99/262 (37%), Positives = 167/262 (63%), Gaps = 4/262 (1%)

Query: 1   MSALLEVTNLHKDF-VTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARML 59
           M+ +L   +L + + V+R  F       A+  VSF LEAG+T+  +G++G GKSTLAR L
Sbjct: 1   MAVVLTARDLTRHYEVSRGMFKGHATVRALNGVSFELEAGKTLAVVGESGCGKSTLARAL 60

Query: 60  AGMVAPTGGEIRVNGELLEHKDYSTRCKL---IRMIFQDPNTSLNPRLQIGTILEGPLKR 116
             +  P+ G +++ G+ +   + + R +L   ++M+FQ P  SLNPR +IG  L  PL  
Sbjct: 61  TLIEEPSAGSLKIAGQEVAGANKAERKQLRKDVQMVFQSPYASLNPRQKIGDQLAEPLLI 120

Query: 117 NTSMTPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEA 176
           NT ++   R  +V+  +++VGL PEH   YP M + GQ+QR+ LARA++LQP +++ADE 
Sbjct: 121 NTKLSATERREKVQAMMKQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEP 180

Query: 177 LNGLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHE 236
            + LD+++++Q+LNLF++LQ+E   ++V++S ++ V++H+ D ++VM+ G  VE G    
Sbjct: 181 TSALDVSIQAQVLNLFMDLQQEFNTAYVFISHNLAVVQHVADDVMVMYLGRPVEMGPNES 240

Query: 237 VLADPQHPITQRMIESHFTKAP 258
           + + P HP TQ ++ +  T  P
Sbjct: 241 IYSRPLHPYTQALLSATPTIHP 262