Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  196 bits (498), Expect = 5e-55
 Identities = 99/262 (37%), Positives = 166/262 (63%), Gaps = 4/262 (1%)

Query: 1   MSALLEVTNLHKDF-VTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARML 59
           MS +L   +L + + V+R  F    +  A+  VSF LEAG+T+  +G++G GKSTLAR L
Sbjct: 1   MSVVLTARDLTRHYEVSRGLFKGSALVRALNGVSFELEAGKTLAVVGESGCGKSTLARAL 60

Query: 60  AGMVAPTGGEIRVNGELLEHKDYSTRCKL---IRMIFQDPNTSLNPRLQIGTILEGPLKR 116
             +  P+ G +++ G+ +     + R +L   ++M+FQ P  SLNPR ++G  L  PL  
Sbjct: 61  TLIEEPSSGSLKIAGQEVAGASKAERKQLRKDVQMVFQSPYASLNPRQKVGDQLGEPLLI 120

Query: 117 NTSMTPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEA 176
           NT+++   R  +V+  + +VGL PEH   YP M + GQ+QR+ LARA++LQP +++ADE 
Sbjct: 121 NTNLSAAERREKVQAMMAQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEP 180

Query: 177 LNGLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHE 236
            + LD+++++Q+LNLF++LQ+E   ++V++S ++ V++H+ D ++VM+ G   E G   E
Sbjct: 181 TSALDVSIQAQVLNLFMDLQQEFNTAYVFISHNLSVVRHVADTVLVMYLGRPAEMGPKEE 240

Query: 237 VLADPQHPITQRMIESHFTKAP 258
           +   P HP TQ ++ +  T  P
Sbjct: 241 IYNRPLHPYTQALLSATPTIHP 262